PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC049096.90 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Dof | ||||||||
Protein Properties | Length: 360aa MW: 38317.7 Da PI: 8.7854 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.6 | 3.2e-39 | 79 | 137 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+s EcC049096.90 79 PENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSS 137 57899***************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 8.5E-33 | 81 | 136 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 2.0E-24 | 82 | 132 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.441 | 82 | 136 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 84 | 120 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005507 | Molecular Function | copper ion binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0016491 | Molecular Function | oxidoreductase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence Send to blast |
MIQELLGSPA LIGERKISMN HGAVILEGMP SPSPCFSPSP TPSPPSSSSS AITKTTAQAT 60 ATATTTGNGT STTTNSSNPE NLRCPRCDSA NTKFCYYNNY NLTQPRHFCK TCRRYWTKGG 120 ALRNVPIGGG CRKNKSSAVS SSASKSSASK FKNLSSEIGR SSFVSAFDPE ISQSQVLWAS 180 PQSSHILALL RANQNPNPSS LGHQASPFMT LKEETNLIGN HMMPEPGIAE SAMNNARNLG 240 MIDPLIHVPS SCTSFLRGNH QQVPHQLNHH QQNGIILSGE AQNSGIQSLY QRLRASTGNN 300 YGYSEHSPAI LSSVASTPPL SSSLSSSILE SVPATATSEL GYWNPAFCVS DLPNTNGSYP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010070497.1 | 0.0 | PREDICTED: dof zinc finger protein DOF5.6 | ||||
TrEMBL | A0A059AZV3 | 0.0 | A0A059AZV3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010070497.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28810.2 | 1e-31 | Dof family protein |