PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC049096.90
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Dof
Protein Properties Length: 360aa    MW: 38317.7 Da    PI: 8.7854
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC049096.90genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.63.2e-3979137361
        zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                    ++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+s
  EcC049096.90  79 PENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSS 137
                   57899***************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027018.5E-3381136IPR003851Zinc finger, Dof-type
ProDomPD0074782.0E-2482132IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.44182136IPR003851Zinc finger, Dof-type
PROSITE patternPS01361084120IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0005507Molecular Functioncopper ion binding
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0008270Molecular Functionzinc ion binding
GO:0016491Molecular Functionoxidoreductase activity
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MIQELLGSPA LIGERKISMN HGAVILEGMP SPSPCFSPSP TPSPPSSSSS AITKTTAQAT  60
ATATTTGNGT STTTNSSNPE NLRCPRCDSA NTKFCYYNNY NLTQPRHFCK TCRRYWTKGG  120
ALRNVPIGGG CRKNKSSAVS SSASKSSASK FKNLSSEIGR SSFVSAFDPE ISQSQVLWAS  180
PQSSHILALL RANQNPNPSS LGHQASPFMT LKEETNLIGN HMMPEPGIAE SAMNNARNLG  240
MIDPLIHVPS SCTSFLRGNH QQVPHQLNHH QQNGIILSGE AQNSGIQSLY QRLRASTGNN  300
YGYSEHSPAI LSSVASTPPL SSSLSSSILE SVPATATSEL GYWNPAFCVS DLPNTNGSYP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010070497.10.0PREDICTED: dof zinc finger protein DOF5.6
TrEMBLA0A059AZV30.0A0A059AZV3_EUCGR; Uncharacterized protein
STRINGXP_010070497.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28810.21e-31Dof family protein