PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC048177.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 153aa MW: 16704.9 Da PI: 10.4707 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.1 | 1.6e-16 | 58 | 105 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 s ykGVr+++ +g+++AeIrdp +r r++lg+f taeeAa a+ + +++ EcC048177.10 58 SEYKGVRRRP-WGKYAAEIRDP----IRkVRVWLGTFNTAEEAALAYQRKKLE 105 569*******.**********7....246******************887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.73E-23 | 58 | 106 | No hit | No description |
SuperFamily | SSF54171 | 3.47E-17 | 58 | 106 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 7.8E-23 | 59 | 106 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.243 | 59 | 118 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.6E-11 | 59 | 106 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-20 | 59 | 113 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.1E-11 | 60 | 71 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.1E-11 | 82 | 98 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
QNKQVIKEIV IPVNSHKSSG EGCSRANNGS QKYISISKKF GCAASARQEK NNVPPPPSEY 60 KGVRRRPWGK YAAEIRDPIR KVRVWLGTFN TAEEAALAYQ RKKLEFDALS VPGKNNTTCQ 120 HLTGPAFLVP SPSSVLDVPS SSSSGNRHEV SAL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 6e-16 | 60 | 101 | 6 | 48 | ATERF1 |
3gcc_A | 6e-16 | 60 | 101 | 6 | 48 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010031938.1 | 1e-106 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
Refseq | XP_010031952.1 | 1e-106 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
Refseq | XP_018723292.1 | 1e-106 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
Refseq | XP_018723293.1 | 1e-106 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
Swissprot | P93007 | 2e-19 | EF112_ARATH; Ethylene-responsive transcription factor ERF112 | ||||
TrEMBL | A0A059CZR5 | 1e-105 | A0A059CZR5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010031938.1 | 1e-106 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 3e-21 | ERF family protein |