PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC047873.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 345aa MW: 38318 Da PI: 6.7886 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.8 | 4.3e-32 | 10 | 64 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFveav qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl EcC047873.10 10 KPRLKWTPELHHRFVEAVMQLGGADKATPKSLMRAMGIPGLTLYHLKSHLQKYRL 64 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.395 | 7 | 67 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.6E-30 | 8 | 66 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.45E-16 | 9 | 65 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-22 | 10 | 65 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.1E-8 | 12 | 63 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.3E-22 | 114 | 160 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003723 | Molecular Function | RNA binding | ||||
GO:0016614 | Molecular Function | oxidoreductase activity, acting on CH-OH group of donors | ||||
GO:0033897 | Molecular Function | ribonuclease T2 activity | ||||
GO:0050660 | Molecular Function | flavin adenine dinucleotide binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence Send to blast |
MNLVLSTDAK PRLKWTPELH HRFVEAVMQL GGADKATPKS LMRAMGIPGL TLYHLKSHLQ 60 KYRLGKSQQS ESCIDTKQEG EFYATENKEV QSADEYQNTE IIDPSTFQMN ESLQIAQALQ 120 MQMEVQRKLH EQIEVQKHLQ LRIEAQGKYL QSVLRKAQET LARYNNSPVG IEAAKAELSQ 180 LVSMVSSGCP GSPFSELTEL GSSDLNDAAR KQLKGICSVE SSLTSSESSG RNEEKPKGNE 240 HGEMHNFSPT SIELRLSNIR PEEVPSQNIC NKTTGRKRCA SSGSDDNSLI AEQSSKSSPR 300 TSYKQKKCGL PVTLDLNSQY QADFDPGPKS IDLNFQGIEQ ANGHF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-18 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-18 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-18 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-18 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 9e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066903.1 | 0.0 | PREDICTED: myb family transcription factor PHL8 | ||||
Swissprot | F4I274 | 1e-78 | PHL8_ARATH; Myb family transcription factor PHL8 | ||||
TrEMBL | A0A059BFT6 | 0.0 | A0A059BFT6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066903.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69580.1 | 5e-81 | G2-like family protein |
Publications ? help Back to Top | |||
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