PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC047286.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 19463.7 Da PI: 4.621 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr++k +g+Wv+eIr+p gk++r++lg++ ++e+Aa+a++ a++ l+g EcC047286.10 20 RYKGVRRRK-WGKWVSEIREP---GKKTRIWLGSYESPEMAAAAYDVAALHLRG 69 6*****998.**********8...557*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 6.60E-20 | 19 | 79 | No hit | No description |
PROSITE profile | PS51032 | 23.499 | 20 | 77 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-30 | 20 | 78 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.3E-13 | 20 | 69 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.92E-22 | 20 | 78 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.8E-36 | 20 | 83 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.1E-12 | 21 | 32 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.1E-12 | 59 | 79 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MQAGGDQCGG DNDNAPCAAR YKGVRRRKWG KWVSEIREPG KKTRIWLGSY ESPEMAAAAY 60 DVAALHLRGP GAALNFPELV EALPKPAGSS SEAVQMAAQE AALRFRRAEG GPGASGGDGD 120 STGSRSSAPA RVGLSPSQIE AINEAPLDSP KMWMELGAGA DSAAAFDLGD MEVDQWGMLQ 180 QSIWD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-15 | 21 | 82 | 6 | 68 | ATERF1 |
3gcc_A | 1e-15 | 21 | 82 | 6 | 68 | ATERF1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 21 | 27 | KGVRRRK |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00227 | DAP | Transfer from AT1G71450 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064857.1 | 1e-112 | PREDICTED: ethylene-responsive transcription factor ERF022 | ||||
TrEMBL | A0A059BV84 | 1e-110 | A0A059BV84_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064857.1 | 1e-111 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33760.1 | 1e-47 | ERF family protein |