PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC046960.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 293aa MW: 33444.8 Da PI: 7.3219 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.2 | 2e-50 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp+GfrFhPtd+elv++yL +k++++++++ +++e+d+yk++PwdLp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + EcC046960.10 8 LPAGFRFHPTDDELVSHYLIRKCASQPISV-PIVAEIDLYKFDPWDLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGR--P 101 799***************************.88***************7666789*************************************98..7 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++ g+kk Lvfy g++p+g+kt+W+mheyrl EcC046960.10 102 KTLGIKKALVFYAGKSPSGVKTNWIMHEYRL 132 78***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.22E-60 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.207 | 8 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.4E-27 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MKKAQLALPA GFRFHPTDDE LVSHYLIRKC ASQPISVPIV AEIDLYKFDP WDLPEMALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGR PKTLGIKKAL VFYAGKSPSG 120 VKTNWIMHEY RLANVDRSAG KKKNSRLDDW VLCRIYNKKR IIEKHFPSAH NKPAEFPEME 180 TKPQIVMPAA LNPYTAPQYG HSPMTTDHIH TDSSESVPKL HTDSSCSDHA VSPDSACDKE 240 VQSEVKWDDW EKALDFQFGS MDNFLEDAFA QGQFQLDQFS PLQDMSMYLQ QSF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-82 | 3 | 164 | 10 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027565.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-119 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059AK13 | 0.0 | A0A059AK13_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027565.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM190 | 28 | 276 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-122 | NAC family protein |