PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC046843.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 278aa MW: 29874.3 Da PI: 8.4499 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.5e-19 | 133 | 183 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ tae+Aa a+++a+ +++g EcC046843.10 133 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAYRMRG 183 7********.***********9987..*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.8E-31 | 132 | 191 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.76E-29 | 133 | 191 | No hit | No description |
PROSITE profile | PS51032 | 24.513 | 133 | 191 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.9E-37 | 133 | 197 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.8E-14 | 133 | 183 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.79E-23 | 133 | 193 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.6E-10 | 134 | 145 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.6E-10 | 157 | 173 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001944 | Biological Process | vasculature development | ||||
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0051301 | Biological Process | cell division | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
MYAQSFQESD LALLESISRH LLLDDSESRL LSSCPNGAQS WTAGLGGDPC PYVAETWGGL 60 PLREDDPDDV VLYRLLNEPA SFGSAPSGSQ EARLPGFAAQ VSVKPEPESF PTWSPECVAT 120 RPPPVAVPAT GRHYRGVRRR PWGKFAAEIR DPAKNGARVW LGTYETAEDA ALAYDRAAYR 180 MRGSRALLNF PLRINSGEPE PVRVTVKRSS PKRPSPESSA SSSSSLDNDA GKRRKKGAGP 240 SVAPAAARVA TPENETKGFQ VGRQVGTSTN GEQLLVSL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 5e-41 | 129 | 198 | 1 | 70 | ATERF1 |
3gcc_A | 5e-41 | 129 | 198 | 1 | 70 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Involved in disease resistance pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630, ECO:0000269|PubMed:9756931}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00548 | DAP | Transfer from AT5G47220 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and Alternaria brassicicola (locally and systemically). Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2) while wounding induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010055446.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor 2 | ||||
Swissprot | O80338 | 2e-65 | EF101_ARATH; Ethylene-responsive transcription factor 2 | ||||
TrEMBL | A0A371EIT9 | 2e-79 | A0A371EIT9_MUCPR; Ethylene-responsive transcription factor 2 (Fragment) | ||||
STRING | XP_010055446.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 2e-49 | ethylene responsive element binding factor 2 |
Publications ? help Back to Top | |||
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