PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC046722.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 246aa MW: 27466.9 Da PI: 7.668 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.5 | 2.1e-12 | 133 | 240 | 2 | 97 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFkld 85 +k lt+sd + ++rl + ++f+++h + ++ ++ +++++d++ + ++ + ++ +sg+yvl++GW keFvk gL +gD v ++ EcC046722.10 133 KKRLTQSDLGHLSRLLIGRDFVKSHflrwmneetvrQVESGKGADVIVRDLDTcSEHRLVFVFWASSGSYVLKGGWiKEFVKRRGLAAGDEVGIYW- 228 5889************************99888887555558899*****9887777788888*************999***********999995. PP SS.SEE..EEEEE CS B3 86 gr.sefelvvkvf 97 + s e++++++ EcC046722.10 229 -EpSASEFHFSLL 240 .445555577665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.94E-15 | 131 | 240 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 0.0028 | 132 | 243 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.46E-18 | 132 | 240 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 3.0E-16 | 133 | 243 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 3.4E-9 | 134 | 238 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0015074 | Biological Process | DNA integration | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003714 | Molecular Function | transcription corepressor activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
RVSHLQDHEQ KPVGDHLRSE VHSPPPSMDS SSCLSSLHDQ EKDRDEGTRG TSSAGVPVAP 60 DRNTKQVGDP SQEIVPAQLK RKSMASLTDA ETLIVEKKAK CQRTQKGKKE ASGCDAEEVS 120 TELTLLFDPY KIKKRLTQSD LGHLSRLLIG RDFVKSHFLR WMNEETVRQV ESGKGADVIV 180 RDLDTCSEHR LVFVFWASSG SYVLKGGWIK EFVKRRGLAA GDEVGIYWEP SASEFHFSLL 240 HKANQA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010042934.1 | 1e-155 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059C500 | 1e-146 | A0A059C500_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058722.1 | 1e-171 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 2e-28 | B3 family protein |