PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC046522.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | TCP | ||||||||
Protein Properties | Length: 171aa MW: 18981.3 Da PI: 10.8498 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 103.4 | 3.9e-32 | 110 | 170 | 2 | 62 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikel 62 +gkkdrhski T +g+RdRR+Rls+++ ++fF Lqd+LGfdk+sktieWLl ++ +ike EcC046522.10 110 TGKKDRHSKIRTVQGLRDRRIRLSVQVSRKFFGLQDMLGFDKASKTIEWLLSKSRNSIKEV 170 79********************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 4.4E-32 | 110 | 170 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 33.048 | 112 | 170 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence Send to blast |
MFSASGDGHH SPFLPTEEAL AIAESSQNQE AGGRPSPFTH FPSVPNHIDG VLSSLHHYFS 60 QQHVAPHDAD FTSFAASDQT TPPKSRVDAN GVRVADPAKN KKALPRKRNT GKKDRHSKIR 120 TVQGLRDRRI RLSVQVSRKF FGLQDMLGFD KASKTIEWLL SKSRNSIKEV V |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010068762.1 | 1e-122 | PREDICTED: transcription factor TCP12 | ||||
TrEMBL | A0A059BGH1 | 9e-59 | A0A059BGH1_EUCGR; Uncharacterized protein (Fragment) | ||||
STRING | XP_010068762.1 | 1e-122 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67260.2 | 9e-28 | TCP family protein |