PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC044933.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Dof | ||||||||
Protein Properties | Length: 378aa MW: 39686.8 Da PI: 9.1612 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.2 | 8.5e-39 | 39 | 98 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+alkcprCds+ntkfCyynnysl+qPr+fCk+CrryWtk GalrnvP+Ggg+rknkk EcC044933.30 39 PEQALKCPRCDSSNTKFCYYNNYSLTQPRHFCKTCRRYWTKNGALRNVPIGGGCRKNKKL 98 7899*****************************************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-27 | 38 | 97 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.3E-32 | 41 | 97 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.901 | 43 | 97 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010052 | Biological Process | guard cell differentiation | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence Send to blast |
MTPPGTAPPK PPPMAGKEEA APSSGSRKAA SSSSSGKQPE QALKCPRCDS SNTKFCYYNN 60 YSLTQPRHFC KTCRRYWTKN GALRNVPIGG GCRKNKKLKP SSASSRLFPG GGGDPKEYYS 120 VAAAPPHPEL GGFKLFHGLA PAVDFQLGGL SNFSKAVQNH NPPAPGIYSQ FSSFSDASAI 180 ETAAAAPTSA ATCFSLDQMA GPSGTILGFN NYHALPPFIA AAPGFGTSGA LHEPGGSMKV 240 DSNLASSIES LSSINQDLHW KLQQQRLAML FSGDNNNNHN PKANNGGDVA ASSINVATAP 300 FEDQSQNLRQ PVLFQNLDAA GSSRKEGSSV TEWFFGNAYA SVTTPSPTNS SSNGNDNNNA 360 GNWNSKGQGQ GFQYTALP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027969.1 | 0.0 | PREDICTED: dof zinc finger protein DOF5.7 | ||||
TrEMBL | A0A059AKU6 | 0.0 | A0A059AKU6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027969.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4950 | 28 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 2e-42 | Dof family protein |