PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC043995.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 192aa MW: 21307.7 Da PI: 10.016 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34 | 5.4e-11 | 81 | 188 | 2 | 97 |
EEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFk 83 +k l++sd + ++rl + ++f+++h + ++ +++++d + + ++ + ++ +sg+yvl+ GW keFvk gL +gD v ++ EcC043995.10 81 KKRLKQSDLGDLSRLLIGRDFVTSHllrwmskemvrqvE--GGKGADVIVRDVDTcSEHRLVFVFWASSGSYVLKVGWiKEFVKRRGLVTGDEVGIY 175 58899***********************98888777542..236779999998777777888888*************899*************999 PP E-SS.SEE..EEEEE CS B3 84 ldgr.sefelvvkvf 97 + s +++++++ EcC043995.10 176 W--DpSASKFHFSLL 188 5..445554577665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 2.55E-13 | 79 | 188 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 5.1E-14 | 80 | 188 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 4.93E-16 | 80 | 188 | No hit | No description |
Pfam | PF02362 | 1.0E-7 | 82 | 186 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MKLIDFLGPA SPPIGDVLKS RDEGAGDISP AIVVAAREFF PLAPDQNMKE VGDPFRGIAP 60 TQRKRKSVAS LADAESLIVI KKRLKQSDLG DLSRLLIGRD FVTSHLLRWM SKEMVRQVEG 120 GKGADVIVRD VDTCSEHRLV FVFWASSGSY VLKVGWIKEF VKRRGLVTGD EVGIYWDPSA 180 SKFHFSLLHK AN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 66 | QRKRKS |
2 | 62 | 84 | RKRKSVASLADAESLIVIKKRLK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058715.2 | 1e-117 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059CBK6 | 1e-118 | A0A059CBK6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010059748.1 | 1e-119 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 3e-23 | B3 family protein |