PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC043570.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 264aa    MW: 29576.2 Da    PI: 5.1324
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC043570.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.8e-20107157255
           AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                   +y+GVr+++ +g+++AeIrd      k +r++lg+f+taeeAa a+++a+++++g
  EcC043570.10 107 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFDTAEEAALAYDKAALRIRG 157
                   7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.9E-32106166IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-24107167IPR016177DNA-binding domain
PROSITE profilePS5103224.092107165IPR001471AP2/ERF domain
SMARTSM003802.7E-37107171IPR001471AP2/ERF domain
PfamPF008473.7E-15107157IPR001471AP2/ERF domain
CDDcd000183.84E-29107166No hitNo description
PRINTSPR003672.4E-11108119IPR001471AP2/ERF domain
PRINTSPR003672.4E-11131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MEKNLNSTAS EPILENVWAS FIGETPPEPS KTWEQLPGLD ERTGSVGMLQ RLPSLGRWVS  60
MGSEAWEEIL SEIIPGMAQS DVKDRTSGSC SEAEVTSPGA KAVIARHYRG VRRRPWGKYA  120
AEIRDSSRKG ARVWLGTFDT AEEAALAYDK AALRIRGPKA YLNFPIEQVV QAIHKDSRYR  180
IPGNSATISQ GRGCNHALPS LEEQIVNPGK RTREWERFDG GMMNEGRPLK RVERTEESRW  240
IDEFDVVEFE DLGNDLLDSL LSCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-27106166464ATERF1
3gcc_A3e-27106166464ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010058963.10.0PREDICTED: ethylene-responsive transcription factor ERF091
TrEMBLA0A059C6E11e-167A0A059C6E1_EUCGR; Uncharacterized protein
STRINGXP_010058963.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.19e-34ERF family protein