PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC042807.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family BES1
Protein Properties Length: 283aa    MW: 30389.6 Da    PI: 7.1136
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC042807.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822142.24.9e-44111035148
        DUF822  35 aqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsisla 131
                   aqGnyklpk++DnneVlkALc+eAGwvve+DGttyrkgskp+   e++g+sa++s +ss+q s++ssa++spv+sy+asp+sssfpsp+++d ++++
  EcC042807.40   1 AQGNYKLPKHCDNNEVLKALCTEAGWVVEEDGTTYRKGSKPP-PGEIMGASANISACSSYQPSPQSSAFPSPVPSYHASPTSSSFPSPTRFDANPSS 96 
                   69****************************************.***************************************************985 PP

        DUF822 132 saasllpvlsvlslvss 148
                       llp+l++ ++++ 
  EcC042807.40  97 ---YLLPFLRNIASIPT 110
                   ...99999999887654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.0E-42192IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008299Biological Processisoprenoid biosynthetic process
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
AQGNYKLPKH CDNNEVLKAL CTEAGWVVEE DGTTYRKGSK PPPGEIMGAS ANISACSSYQ  60
PSPQSSAFPS PVPSYHASPT SSSFPSPTRF DANPSSYLLP FLRNIASIPT NLPPLRISSS  120
APVTPPLSSP TSRNSKRKPD WESLSNSSIH KSSFRHPLFA ASAPSSPTRR QNMTPPTIPE  180
CDESDASTVD SGRWVSFHQN VAVAAAAPPS PTFNLVKSSS QQGPLKDGVE QNGNLAWVAS  240
SDRAWGSEFE FENGRVKPWE GERIHEIGVD DLELTLGSSK ARA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-22150402451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-22150402451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-22150402451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-22150402451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001306904.10.0BES1/BZR1 homolog protein 2-like
SwissprotQ94A431e-107BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A059AY570.0A0A059AY57_EUCGR; Brassinazole-resistant 1 protein
STRINGXP_010070026.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.26e-88BES1 family protein