PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC041920.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 457aa    MW: 48829.2 Da    PI: 6.2894
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC041920.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.81.8e-16258311457
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                    kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L  eN++L k+l+ +++++ 
  EcC041920.10 258 AKRVRRMLSNRESARRSRRRKQAHLSELETQVAQLRVENSTLLKRLSDISQKYN 311
                   79*******************************************999998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575134No hitNo description
SMARTSM003382.4E-19255319IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.737257311IPR004827Basic-leucine zipper domain
PfamPF001701.5E-14258310IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.9E-12259310No hitNo description
SuperFamilySSF579599.64E-12259309No hitNo description
CDDcd147025.58E-7260311No hitNo description
PROSITE patternPS000360262277IPR004827Basic-leucine zipper domain
PfamPF124982.3E-43326446IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MDRGFSVDEI SDHFWSSPRP PPAAPLTSSS SSSCRSQPPP PPPSSKMNRS ESEWAFQRYL  60
QEASVSAASS GRGDEGDVVE IKGPRPDRGR DQGPIRKQPP DPNAVNKDAS EVSSASPPPP  120
PAAPYVDSIA PPPEPLPTNS EEYQAFLKSK LELACAAVAL SQAPFVINQD SGTPADNSQA  180
SKASLVGSQA PSKGVGPELS KLQDEEAGGL VVIPSLPAMP KKSGIPVRST TSGSSRDLSD  240
DDEIGETATT DHLGPLDAKR VRRMLSNRES ARRSRRRKQA HLSELETQVA QLRVENSTLL  300
KRLSDISQKY NVAAVDNRVL KADVETLRAK VKMAEETVKR VTGLNPMLHV MSDMSSVGVP  360
PFDGSPSDAS ADAAVPVRDD PKHQFYQTNS SNPASSADEM RTNNGLADIP AAENAQQNGA  420
AKIGRTASMQ RVASLEHLQK RIRGDSSPRG PPYDGEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1271278RRSRRRKQ
2273278SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018717338.10.0PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-112CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A059B6530.0A0A059B653_EUCGR; Uncharacterized protein
STRINGXP_010027195.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM68462743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.28e-64bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]