PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC037933.50 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 53aa MW: 5305.81 Da PI: 7.5451 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 41.6 | 2.8e-13 | 29 | 53 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt +LHerFv+av++LGG++ EcC037933.50 29 KPRLRWTADLHERFVDAVTRLGGPD 53 79*********************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.6E-11 | 25 | 53 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.0E-8 | 29 | 53 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:1900056 | Biological Process | negative regulation of leaf senescence | ||||
GO:1900150 | Biological Process | regulation of defense response to fungus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0010008 | Cellular Component | endosome membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0016491 | Molecular Function | oxidoreductase activity | ||||
GO:0016758 | Molecular Function | transferase activity, transferring hexosyl groups | ||||
GO:0070273 | Molecular Function | phosphatidylinositol-4-phosphate binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 53 aa Download sequence Send to blast |
MYGGSGSGSG SESGGGGGGG GVVMTRDPKP RLRWTADLHE RFVDAVTRLG GPD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016571644.1 | 2e-17 | PREDICTED: myb family transcription factor APL isoform X1 | ||||
Refseq | XP_016571647.1 | 2e-17 | PREDICTED: myb family transcription factor APL isoform X2 | ||||
Swissprot | C0SVS4 | 1e-13 | PHLB_ARATH; Myb family transcription factor PHL11 | ||||
TrEMBL | A0A2G3AFT2 | 2e-16 | A0A2G3AFT2_CAPAN; Myb family transcription factor APL | ||||
TrEMBL | A0A2G3DCU0 | 2e-16 | A0A2G3DCU0_CAPCH; Myb family transcription factor APL (Fragment) | ||||
STRING | Solyc08g076010.2.1 | 3e-16 | (Solanum lycopersicum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.1 | 3e-16 | G2-like family protein |
Publications ? help Back to Top | |||
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