PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC036920.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 122aa MW: 13632.7 Da PI: 10.6528 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.1 | 1.9e-28 | 68 | 117 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtpeLH+rF ave+LGG+++AtPk +l++m++kgLt++hvkSHLQ EcC036920.10 68 PRLRWTPELHQRFTLAVERLGGEDRATPKMVLQIMGMKGLTISHVKSHLQ 117 9************************************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.95 | 64 | 122 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.2E-27 | 64 | 117 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.2E-14 | 65 | 118 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.5E-22 | 68 | 118 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 8.6E-8 | 69 | 118 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence Send to blast |
MVHGEESFLK RSDSPSSSVV IVDGPSSESS DLRGNRMRDH GTLALLPLGT INQQQLSPVR 60 PYVRSKTPRL RWTPELHQRF TLAVERLGGE DRATPKMVLQ IMGMKGLTIS HVKSHLQVCL 120 FT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 5e-18 | 69 | 117 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 5e-18 | 69 | 117 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 5e-18 | 69 | 117 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 5e-18 | 69 | 117 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 6e-18 | 69 | 117 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018728306.1 | 1e-45 | PREDICTED: uncharacterized protein LOC108959263 isoform X2 | ||||
Swissprot | Q700D9 | 2e-24 | MYBF_ARATH; Putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A059CF66 | 1e-33 | A0A059CF66_EUCGR; Uncharacterized protein | ||||
STRING | BRADI4G26800.1 | 4e-29 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM363 | 28 | 184 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 4e-28 | G2-like family protein |