PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC034214.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB_related | ||||||||
Protein Properties | Length: 55aa MW: 6396.45 Da PI: 10.2359 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.6 | 2.4e-07 | 19 | 47 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+W+++Ed +lv +v ++G +W+ a+ EcC034214.10 19 KGAWSAQEDRKLVAYVMRYGIWNWTHMAE 47 79******************999988775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.0E-9 | 13 | 47 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 9.439 | 14 | 55 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 5.94E-8 | 14 | 47 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 0.00113 | 21 | 47 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 55 aa Download sequence Send to blast |
MARYPRVDKI SNGKKTVKKG AWSAQEDRKL VAYVMRYGIW NWTHMAEPAG ECVMH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010030549.1 | 6e-27 | PREDICTED: transcription factor MYB23 | ||||
TrEMBL | A0A059AM79 | 1e-25 | A0A059AM79_EUCGR; Uncharacterized protein | ||||
STRING | XP_010030549.1 | 2e-26 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 9e-09 | MYB-like 102 |