PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC032060.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 309aa MW: 33217.9 Da PI: 6.6511 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.1 | 1e-33 | 49 | 103 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl EcC032060.30 49 KQRLRWTHDLHDRFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 13.072 | 46 | 106 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.87E-17 | 47 | 103 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.9E-32 | 48 | 104 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.1E-26 | 49 | 104 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.8E-9 | 51 | 102 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.6E-23 | 136 | 182 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009301 | Biological Process | snRNA transcription | ||||
GO:0009926 | Biological Process | auxin polar transport | ||||
GO:0009942 | Biological Process | longitudinal axis specification | ||||
GO:0009945 | Biological Process | radial axis specification | ||||
GO:0010014 | Biological Process | meristem initiation | ||||
GO:0010311 | Biological Process | lateral root formation | ||||
GO:0015074 | Biological Process | DNA integration | ||||
GO:0043697 | Biological Process | cell dedifferentiation | ||||
GO:0060184 | Biological Process | cell cycle switching | ||||
GO:0071365 | Biological Process | cellular response to auxin stimulus | ||||
GO:0071368 | Biological Process | cellular response to cytokinin stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004857 | Molecular Function | enzyme inhibitor activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence Send to blast |
MYQQKGGASS SLVPGNTMVH GQHLDSGANT MDSIGGGNNH SNNANLTSKQ RLRWTHDLHD 60 RFVDAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDGKKAEKK 120 ESADVLSDMD GSSGGMQITE ALKLQMEVQK RLHEQLEVQR QLQLRIEAQG KYLKKIIEEQ 180 QRLSGALADG SADESGDKGQ EDSKTDPPTP APISESPIQD KSKDCAVAKS LSLDGSLSSH 240 NHEPLTPDSS CNVSSPAESP DGERSAKKPR VTAGASHAEP EIVLHPIFES SLGCSYTNSS 300 FKLPDQGSV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 4e-23 | 49 | 106 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-23 | 49 | 106 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-23 | 49 | 106 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-23 | 49 | 106 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018727520.1 | 0.0 | PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor PHL7-like | ||||
Swissprot | Q9SJW0 | 1e-126 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A059CF79 | 0.0 | A0A059CF79_EUCGR; Uncharacterized protein | ||||
STRING | XP_006467243.1 | 1e-150 | (Citrus sinensis) | ||||
STRING | XP_006449962.1 | 1e-150 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 1e-113 | G2-like family protein |