PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC031961.40 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23180.8 Da PI: 5.8545 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.9e-19 | 48 | 97 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r +r +lg+f t eAa a+++a++kl+g EcC031961.40 48 TYRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSLEAALAYDKAARKLHG 97 69****999.**********8...3.35**************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.67E-30 | 47 | 107 | No hit | No description |
SuperFamily | SSF54171 | 3.33E-21 | 48 | 106 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.1E-30 | 48 | 106 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.8E-13 | 48 | 97 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.825 | 48 | 105 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-33 | 48 | 111 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-9 | 49 | 60 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-9 | 71 | 87 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0072488 | Biological Process | ammonium transmembrane transport | ||||
GO:0016020 | Cellular Component | membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008519 | Molecular Function | ammonium transmembrane transporter activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MQTMDQLHQA QVLAGKKKEA VKTKKPSMGR SRKGCMRGKG GPENALCTYR GVRQRTWGKW 60 VAEIREPNRG ARLWLGTFNT SLEAALAYDK AARKLHGSSA RLNLPATMTT VTTPIDSNDN 120 SSNFSLAGSS NSCICEQAAK SEAVDVNSRD PFIMRDDTSN DTTGDANYNY VDWSGEDLVV 180 PDMVNEDQGD YKCWPEFSFG SDYLEMSDLG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 3e-19 | 49 | 105 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010043317.1 | 1e-154 | PREDICTED: ethylene-responsive transcription factor ERF071 | ||||
TrEMBL | A0A1J0MRG7 | 1e-128 | A0A1J0MRG7_EUCGU; Dehydration-responsive element-binding protein 2-02 | ||||
STRING | XP_010043317.1 | 1e-153 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18450.1 | 5e-44 | ERF family protein |