PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC029393.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TCP
Protein Properties Length: 206aa    MW: 21680.5 Da    PI: 7.9026
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC029393.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP101.21.8e-3147119766
           TCP   7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............s 66 
                   +  ++hTkv+gR+RR+R++a+caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tg               
  EcC029393.10  47 PARDRHTKVNGRGRRIRIPALCAARIFQLTRELGHRSDGETIEWLLRCAEPSIIAATGYgsmpadpitttvgA 119
                   5689*******************************************************44444444444440 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136925.03548102IPR017887Transcription factor TCP subgroup
PfamPF036342.7E-2648112IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MGSIISPQDF PSSDQNSPPN LAAAAVEAPP PKPHRQVALS RKSTAAPARD RHTKVNGRGR  60
RIRIPALCAA RIFQLTRELG HRSDGETIEW LLRCAEPSII AATGYGSMPA DPITTTVGAL  120
PPSSTPASAP CPAQPLALAP PAAGHGAFPI SPPPDCRLDL SQPNGFDFSA GGCASNGYRH  180
MPFTALLLQP TATEEAEERQ QREILG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010046620.11e-146PREDICTED: transcription factor TCP11
SwissprotQ9SJK71e-38TCP11_ARATH; Transcription factor TCP11
TrEMBLA0A059DDZ61e-145A0A059DDZ6_EUCGR; Uncharacterized protein
STRINGXP_010046620.11e-146(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37000.14e-38TCP family protein