PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC026851.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 21663.3 Da PI: 4.3366 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 17 | 67 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGVr +k +g+Wv+eIr p++ r r++lg+++++e+Aa+a +aa +l+g EcC026851.10 17 SRYKGVRLRK-WGKWVSEIRLPNS---RERIWLGSYDSPEKAARAFDAALYCLRG 67 79******99.**********933...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.4E-11 | 17 | 67 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.15E-21 | 17 | 77 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 4.09E-26 | 17 | 77 | No hit | No description |
SMART | SM00380 | 9.0E-31 | 18 | 81 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.601 | 18 | 75 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-28 | 18 | 77 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-8 | 19 | 30 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-8 | 41 | 57 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MDEGAGFSGG PADGGSSRYK GVRLRKWGKW VSEIRLPNSR ERIWLGSYDS PEKAARAFDA 60 ALYCLRGRQA QFNFPDSPPD IAGAQGLTPQ EIRAVAAQFA NQWPERSGRS RRNDDGHGAS 120 SMAAQEGGDN GNGNDGGGSS IDWSFLNALD DDCAGSGFGL YDGLDYVGGS QLEPPPEASS 180 TTDNAEDENG GGNGFYCHQL WNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 5e-14 | 18 | 75 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010051344.2 | 1e-124 | PREDICTED: ethylene-responsive transcription factor ERF017 | ||||
TrEMBL | A0A059CUB8 | 1e-123 | A0A059CUB8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010051344.1 | 1e-123 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1614 | 28 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 1e-46 | ERF family protein |