PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC026270.70 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 167aa MW: 19654.9 Da PI: 9.5 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 121.5 | 7.5e-38 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvka......eekewyfFskrdkkyatgkrknratksgyWkatg 87 lp G+rFhPtdeelv++yLk kv g++ ++ +i+evdi+k+ePw++pk k + + +ew+fF+++ r +r+t g+Wk+tg EcC026270.70 10 LPIGYRFHPTDEELVDHYLKLKVLGSRGNI-CIIPEVDICKWEPWEFPKifeeK--SivppddKVQEWWFFCPQTP------RIQRSTPLGFWKKTG 97 699************************998.77***************745551..1455544666******9866......7899*********** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 d+++++ +++++g+kktLvf++g+ ++g t+Wv+hey+l EcC026270.70 98 IDRTIKAGdRNREIGTKKTLVFHRGHGKRGIGTKWVIHEYHL 139 ******9867788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.06E-39 | 5 | 146 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 40.338 | 10 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-23 | 11 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MAAAIIPKNL PIGYRFHPTD EELVDHYLKL KVLGSRGNIC IIPEVDICKW EPWEFPKIFE 60 EKSIVPPDDK VQEWWFFCPQ TPRIQRSTPL GFWKKTGIDR TIKAGDRNRE IGTKKTLVFH 120 RGHGKRGIGT KWVIHEYHLL TNNLNELFPR AVCNLSLVYF FWFTTFI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-30 | 9 | 139 | 14 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018733119.1 | 1e-120 | PREDICTED: protein NTM1-like 9 | ||||
Swissprot | B5X570 | 1e-41 | NAC14_ARATH; NAC domain-containing protein 14 | ||||
TrEMBL | A0A059BC56 | 1e-106 | A0A059BC56_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066077.1 | 6e-93 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 5e-44 | NAC 014 |