PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC026137.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 130aa MW: 15014.4 Da PI: 9.1696 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.3 | 5.7e-13 | 19 | 108 | 3 | 79 |
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-E CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltled.esgrsWevkliyrkksgryvltkGW.keFvkangLkegDf 79 k+lt sd + ++rl lp ++++h + k+ee++ ++ +d +gr+ ++ ++ +k+ g+yvl +GW keFv++++Lk+gD EcC026137.10 19 KKLTESDLSPLSRLLLPGGCLQTHvfpqmdekmlrQVKSEEGMPVVGKDvATGREHQFVFRCWKSTGSYVLNGGWtKEFVEEKRLKVGDE 108 99***********************9977666666555556666776666666888888888*************668***********4 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 6.47E-17 | 14 | 125 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.2E-17 | 17 | 119 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 9.4E-10 | 19 | 109 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.15E-10 | 71 | 125 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence Send to blast |
RVDVSTDLAL YEDPWKIRKK LTESDLSPLS RLLLPGGCLQ THVFPQMDEK MLRQVKSEEG 60 MPVVGKDVAT GREHQFVFRC WKSTGSYVLN GGWTKEFVEE KRLKVGDEIG MVWFMSSRMF 120 YFKVLHRAAA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058732.1 | 3e-74 | PREDICTED: gibberellin 2-beta-dioxygenase 8 | ||||
Refseq | XP_010058735.1 | 4e-76 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059C513 | 5e-77 | A0A059C513_EUCGR; Uncharacterized protein | ||||
STRING | XP_010058732.1 | 1e-73 | (Eucalyptus grandis) | ||||
STRING | XP_010058735.1 | 1e-75 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 2e-15 | B3 family protein |