PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC022022.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Dof
Protein Properties Length: 205aa    MW: 19779 Da    PI: 8.3686
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC022022.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof62.95.7e-201342962
        zf-Dof 29 PryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                  Pr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s
  EcC022022.10  1 PRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 34
                  9*****************************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-12132IPR003851Zinc finger, Dof-type
PfamPF027012.5E-15132IPR003851Zinc finger, Dof-type
PROSITE profilePS5088417.644132IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
PRHFCKSCRR YWTHGGTLRD IPVGGGSRKN AKRSRTGASA SSSSSSAAVV LPGVAPQDHH  60
LHAASLLLPF AGSHGGPVHL AGGDGDGKPG LNVCGSFTSL LNAHGPPGFL ALGGFGLGLG  120
PGGLDEMAFG LGRGVWPFQG VGDGVAAGVG SNGGPAGIGN AWQFEGGDEG GLVGGGGGGG  180
GGGGGGDSCF SWPGLAISTA WSGLK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018715572.11e-91PREDICTED: dof zinc finger protein DOF3.4-like
TrEMBLA0A059B0U61e-90A0A059B0U6_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010026408.12e-91(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM22862874
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.11e-26OBF binding protein 1