PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC022022.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Dof | ||||||||
Protein Properties | Length: 205aa MW: 19779 Da PI: 8.3686 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 62.9 | 5.7e-20 | 1 | 34 | 29 | 62 |
zf-Dof 29 PryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 Pr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s EcC022022.10 1 PRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 34 9*****************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 5.0E-12 | 1 | 32 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.5E-15 | 1 | 32 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 17.644 | 1 | 32 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
PRHFCKSCRR YWTHGGTLRD IPVGGGSRKN AKRSRTGASA SSSSSSAAVV LPGVAPQDHH 60 LHAASLLLPF AGSHGGPVHL AGGDGDGKPG LNVCGSFTSL LNAHGPPGFL ALGGFGLGLG 120 PGGLDEMAFG LGRGVWPFQG VGDGVAAGVG SNGGPAGIGN AWQFEGGDEG GLVGGGGGGG 180 GGGGGGDSCF SWPGLAISTA WSGLK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018715572.1 | 1e-91 | PREDICTED: dof zinc finger protein DOF3.4-like | ||||
TrEMBL | A0A059B0U6 | 1e-90 | A0A059B0U6_EUCGR; Uncharacterized protein (Fragment) | ||||
STRING | XP_010026408.1 | 2e-91 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2286 | 28 | 74 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 1e-26 | OBF binding protein 1 |