PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC020669.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 213aa MW: 23310 Da PI: 8.7864 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.3 | 2.6e-31 | 99 | 154 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k r+ W+p LH+rF++a++qLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ EcC020669.10 99 KRRRSWSPALHQRFLDALQQLGGPQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 154 6799**************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 15.781 | 96 | 156 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.87E-16 | 96 | 157 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.3E-28 | 97 | 157 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-26 | 99 | 154 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.8E-8 | 101 | 152 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006979 | Biological Process | response to oxidative stress | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004601 | Molecular Function | peroxidase activity | ||||
GO:0020037 | Molecular Function | heme binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
IVEEQKLAAC EDQSQFRTCE SRNADARQSH PLFPSAMASG ELAEIPLHGF LSLGVGIKNP 60 SEESSSSTGT VSGRSRTISS VDCNAPSSSR GGNQQTAKKR RRSWSPALHQ RFLDALQQLG 120 GPQVATPKQI RELMQVDGLT NDEVKSHLQK YRLHNQRHPI KAFRSQKSGI QTVLPMATDI 180 SGDSLKMTGP QSPSPQSSFH HCGESWVDLP HCQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010028507.1 | 1e-129 | PREDICTED: myb family transcription factor EFM isoform X2 | ||||
Swissprot | F4JRB0 | 6e-27 | HHO5_ARATH; Transcription factor HHO5 | ||||
TrEMBL | A0A059ANG4 | 1e-129 | A0A059ANG4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010028507.1 | 1e-129 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4922 | 26 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37180.2 | 8e-29 | G2-like family protein |
Publications ? help Back to Top | |||
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