PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC015949.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 193aa MW: 20542.5 Da PI: 10.4594 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.3 | 3e-32 | 27 | 82 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ EcC015949.10 27 KQRRCWSPELHRRFLQSLQQLGGPHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 82 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.251 | 24 | 84 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.7E-28 | 24 | 85 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 9.75E-19 | 24 | 85 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.5E-28 | 27 | 82 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.1E-7 | 29 | 80 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
STADTTTANG NGNGTRKEEK EGQTQRKQRR CWSPELHRRF LQSLQQLGGP HVATPKQIRE 60 LMKVDGLTND EVKSHLQKYR LHTRRPSPTQ HGGNSQAPQF VVVGGIWVPP PEYATVAAST 120 TTTASGEAAR PSPSSAGVYA PLAIAAAPQQ RNPSKDHSPS HSEGRGSHSA GDAHSKSPST 180 SSSTHTATSS PID |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269|PubMed:27016098}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269|PubMed:27016098}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066739.1 | 1e-137 | PREDICTED: myb family transcription factor EFM | ||||
Swissprot | Q8VZS3 | 9e-50 | HHO2_ARATH; Transcription factor HHO2 | ||||
TrEMBL | A0A059BEW8 | 1e-136 | A0A059BEW8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066739.1 | 1e-136 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3491 | 28 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68670.1 | 2e-50 | G2-like family protein |
Publications ? help Back to Top | |||
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