PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC014144.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 342aa    MW: 38248.6 Da    PI: 7.3918
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC014144.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.61.3e-45111612129
           NAM  12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvf 108
                   eel+++yL  kv++  ++  ++i++vd++k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ +g lvg+kktLvf
  EcC014144.10   1 EELITCYLSCKVSDIGFTS-KAIADVDLNKCEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFR-GGILVGMKKTLVF 95 
                   7***************999.88***************988999****************************************.************* PP

           NAM 109 ykgrapkgektdWvmheyrle 129
                   ykgrap+gek++Wvmheyrle
  EcC014144.10  96 YKGRAPRGEKSNWVMHEYRLE 116
                   *******************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100550.871136IPR003441NAC domain
PfamPF023659.4E-201115IPR003441NAC domain
SuperFamilySSF1019412.09E-531136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
EELITCYLSC KVSDIGFTSK AIADVDLNKC EPWDLPGKAS MGEKEWYFFS LRDRKYPTGL  60
RTNRATEAGY WKTTGKDKEI FRGGILVGMK KTLVFYKGRA PRGEKSNWVM HEYRLENKHP  120
FKSTKEEWVV CRVFQKTAVK KPQPALSSEQ SPDSPGDTNS ALHDQYGDIE LSNSLTGMPN  180
NASSGFADIN LAQNYSNHSD SAAYNMQSNP HMNMMNNWPS SARETIAGLP SLPWPSTLLS  240
SNLAVNALLL KALQVRNNGN YSHQPRDQAA TLLGTYDYSN HLQPQQQAQG ASHHHHNLFG  300
MNDLTSSTSF NVSSSSKDLE SSVPDHQQPE QPFSWTPLRE GI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-45113628165NO APICAL MERISTEM PROTEIN
1ut4_B3e-45113628165NO APICAL MERISTEM PROTEIN
1ut7_A3e-45113628165NO APICAL MERISTEM PROTEIN
1ut7_B3e-45113628165NO APICAL MERISTEM PROTEIN
4dul_A3e-45113628165NAC domain-containing protein 19
4dul_B3e-45113628165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00364DAPTransfer from AT3G18400Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010032017.10.0PREDICTED: NAC domain-containing protein 92
TrEMBLA0A059D0650.0A0A059D065_EUCGR; Uncharacterized protein
STRINGXP_010032017.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM55272649
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-90NAC domain containing protein 58