PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC013670.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 194aa MW: 22658.3 Da PI: 5.1346 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 98.8 | 8.1e-31 | 6 | 133 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 G+rF+Pt+eel++++L +kv g + ++ +++e+ d y ++PwdLp+ +v ++ +wyf +++ +++++r +r+t+sg Wk t + e+ EcC013670.30 6 GGYRFSPTEEELINDHLMRKVLGYTDHC--IVPELeDFYAWDPWDLPRvhqeisNVPSDGWDWYFLCPSPYLAQNSERIKRKTSSGNWKITSQRDEI 100 59***********************888..566666***********5355443333355599********************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ ++ l+g k++L+fy ++ +kt W++hey+l EcC013670.30 101 KTRdTRVLIGSKRILTFY----KNRVKTGWILHEYHL 133 *9956667**********....344799********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 36.035 | 4 | 157 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.89E-35 | 5 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.8E-20 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MEPFQGGYRF SPTEEELIND HLMRKVLGYT DHCIVPELED FYAWDPWDLP RVHQEISNVP 60 SDGWDWYFLC PSPYLAQNSE RIKRKTSSGN WKITSQRDEI KTRDTRVLIG SKRILTFYKN 120 RVKTGWILHE YHLNHKLLDG YSSTLQIPYV LCRLKRKPGE SFDISPSFEG GESSVTDDTP 180 IAAEHESTED TDQE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-18 | 7 | 157 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-18 | 7 | 157 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-18 | 7 | 157 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-18 | 7 | 157 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
3swm_B | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
3swm_C | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
3swm_D | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
3swp_A | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
3swp_B | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
3swp_C | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
3swp_D | 3e-18 | 7 | 157 | 23 | 168 | NAC domain-containing protein 19 |
4dul_A | 3e-18 | 7 | 157 | 20 | 165 | NAC domain-containing protein 19 |
4dul_B | 3e-18 | 7 | 157 | 20 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010026029.1 | 3e-84 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059BFB2 | 1e-131 | A0A059BFB2_EUCGR; Uncharacterized protein | ||||
STRING | XP_010068654.1 | 1e-138 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.3 | 7e-34 | NAC transcription factor-like 9 |