PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC013137.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 252aa MW: 27991.5 Da PI: 8.495 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.2 | 3.9e-33 | 19 | 72 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+ EcC013137.10 19 PRLRWTPELHQCFVHAIQRLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.624 | 15 | 75 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.1E-32 | 15 | 76 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.76E-16 | 17 | 74 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-24 | 19 | 72 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.7E-9 | 20 | 71 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MGSCGRSGTV RQYVRSKVPR LRWTPELHQC FVHAIQRLGG QDKATPKLVL QLMDVRGLTI 60 SHVKSHLQMY RSMRSDLGRS DRGCGQQKRR AAEDDDPDRD GGCVEEVNDD EGPPHAFAKP 120 VHHSRFACSS PPCKRSRTEK VATTTTTTSA VAEQAPYGFE IAKLQDRMQM PRKGLKLRDW 180 RSFPLEEYEV SQGCELSLSL SLQCHSIHRS NGSSTSEISE AFSSCSRSRE CSGPYSDKSS 240 VNLDLSIALC GS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 1e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-19 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010043897.1 | 1e-161 | PREDICTED: uncharacterized protein LOC104432988 | ||||
TrEMBL | A0A059D699 | 1e-160 | A0A059D699_EUCGR; Uncharacterized protein | ||||
STRING | XP_010043897.1 | 1e-161 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM363 | 28 | 184 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14600.1 | 2e-34 | G2-like family protein |