PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC007349.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 278aa    MW: 30116.9 Da    PI: 4.8821
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC007349.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.57.7e-15196255361
                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHH CS
        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklks 61 
                   + +r+rr++kNRe+A rsR+RK+a++ eLe  + +Le+eN++L k+++e+ k+   +l  
  EcC007349.20 196 AQQRQRRMIKNRESAARSRERKQAYQVELESLAMQLEEENEQLlKEKAERTKERFRQLME 255
                   679**************************************9725668888887777755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-12192254No hitNo description
SMARTSM003382.6E-10194258IPR004827Basic-leucine zipper domain
PfamPF001702.3E-13196255IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013196248IPR004827Basic-leucine zipper domain
CDDcd147074.02E-16198244No hitNo description
SuperFamilySSF579591.2E-9199246No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MASSKPREPD SSRRLSISSS SSASATSDLL TAIDRAHSLA ANGGSPMAAR DAPSSESTLL  60
DAAAAAHLGD PPAPLAAART VDDVWREIVA GQRVECKEEM PDEMMTLEDF LVRAGASAGA  120
EEGEEEEDVE VKVDPAERMG SMGSMGSGAF SFDAMAPSTI EAVEGSIVGF GNGVELMGGG  180
RGKRGACVLE PLDKAAQQRQ RRMIKNRESA ARSRERKQAY QVELESLAMQ LEEENEQLLK  240
EKAERTKERF RQLMEKVVPI VEKPKTARVL RRVRSLQW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064805.11e-110PREDICTED: LOW QUALITY PROTEIN: G-box-binding factor 4-like
SwissprotP427775e-59GBF4_ARATH; G-box-binding factor 4
TrEMBLF6GY421e-86F6GY42_VITVI; Uncharacterized protein
STRINGXP_010064805.11e-109(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38522855
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.17e-52bZIP family protein