PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC007135.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 703aa    MW: 80466.4 Da    PI: 6.5577
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC007135.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS358.78.8e-1103327012374
          GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                   ++lL++cA+av+s+d++ a+alL++++++asp gd +qRla+yf+++L+arla+++ ++y+ l  ++t+    ++ l+a++l+  ++P+ + s+ + 
  EcC007135.10 332 RTLLIQCAQAVASNDHRSANALLNEIRKHASPFGDGTQRLAHYFANGLEARLAGTGGQIYRGLVNRKTT---AADMLNAYHLYLAACPFQRYSNTVS 425
                   689************************************************************999999...9************************ PP

          GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                    +++ + v+ + r+HiiDf+i +G+ Wp+L+q L+ Rp + p+lRiTg++ p++g   +++++etg+rLa++Ae+++vpfe+n+ +akr+e +elee
  EcC007135.10 426 CRMVIDTVADKMRIHIIDFGILYGFRWPTLIQLLSRRPCP-PKLRITGIDLPQPGfrPAQRIKETGRRLANYAESFNVPFEYNA-IAKRWEFIELEE 520
                   ***********************************99865.9************9*****************************.7*********** PP

          GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                   L+++++E+++Vn++++ ++l+de+v+ es+rd vL+l+++ +P+++++   + ++n++ F++rf eal+++s+lfd+l++ +p e++er+ +E++ l
  EcC007135.10 521 LKIDRDEVTIVNCMFRFENLFDETVAEESPRDIVLNLIRRAQPDLFIHGVINGNYNAPFFVTRFREALHHFSSLFDMLDTIIPCENQERMLIEKVTL 617
                   ************************************************************************************************* PP

          GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   +re+ n +aceg er+er e++++W+ r ++aGF +vpls + a+ +   ++  + + + v+e  ++l++gWk+r L+++S W+
  EcC007135.10 618 EREALNTIACEGWERVERPESYKQWQLRNMRAGFVQVPLSRRLAQFVFNKIASRYHKDFVVDEVGKWLLIGWKGRFLYAFSTWK 701
                   *****************************************98887776666666566*************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098562.431305681IPR005202Transcription factor GRAS
PfamPF035143.0E-107332701IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    Send to blast
MMDPLMGALY PSDGFRPDDQ SISAVVDHCL VSRPTFQSAP DRCGEMHHLV DVAPFSNECR  60
DAPDTEETEF SDAVFEYISR ILMEEDIEEK TCMLQDSLDL LSAEKSFYEV LGKKYPPSPE  120
PSRTNCITYN DKDSNDSLLD GTRYTSTIGS RKTGYYANIG QVENPSNYGT MRFERDISPA  180
AFQPNQGGNA ERPDLCSESR FIRQFRMGVE ESSKFLPNQA TTELLYQEPH GKIDKVDRLG  240
ALKRKESLHM EEGNMEERSS KQAFVHEESV LRSDAFDAVL LNIQGEGLAH LMNLRASLKH  300
RVNEIAHKIE EPKGGRGHGE KKRGKVEVVD VRTLLIQCAQ AVASNDHRSA NALLNEIRKH  360
ASPFGDGTQR LAHYFANGLE ARLAGTGGQI YRGLVNRKTT AADMLNAYHL YLAACPFQRY  420
SNTVSCRMVI DTVADKMRIH IIDFGILYGF RWPTLIQLLS RRPCPPKLRI TGIDLPQPGF  480
RPAQRIKETG RRLANYAESF NVPFEYNAIA KRWEFIELEE LKIDRDEVTI VNCMFRFENL  540
FDETVAEESP RDIVLNLIRR AQPDLFIHGV INGNYNAPFF VTRFREALHH FSSLFDMLDT  600
IIPCENQERM LIEKVTLERE ALNTIACEGW ERVERPESYK QWQLRNMRAG FVQVPLSRRL  660
AQFVFNKIAS RYHKDFVVDE VGKWLLIGWK GRFLYAFSTW KPA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A2e-4333770225380Protein SCARECROW
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010042112.10.0PREDICTED: scarecrow-like protein 9
SwissprotO809330.0SCL9_ARATH; Scarecrow-like protein 9
TrEMBLA0A059A7780.0A0A059A778_EUCGR; Uncharacterized protein
STRINGXP_010042112.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35827189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein