PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC004877.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 141aa MW: 16527.8 Da PI: 10.0513 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 117.5 | 1.3e-36 | 6 | 136 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lp+GfrF+Ptd+elv++yLk +++ e++i+evd++++ PwdLp ++k++ +ew+fF + ++ky+++++++ + + g Wk tgk ++ EcC004877.10 6 LPVGFRFRPTDDELVNQYLKTLGNETV---EQIIPEVDVHQLPPWDLPVkinelsRIKSDGDEWFFFGRLQNKYPQSNQARMTNDYGSWKPTGKPHK 99 79*****************86443333...368***************54788877777889*************98777778889*********** PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 + ++ ++++ glkk+Lvf k ++pk +t+Wv+hey EcC004877.10 100 IRTQdRKNTLGLKKILVFKKRQSPKNAHTKWVLHEYG 136 *99977888***************************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.12E-35 | 4 | 140 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 37.961 | 6 | 141 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.0E-20 | 7 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
TSLVDLPVGF RFRPTDDELV NQYLKTLGNE TVEQIIPEVD VHQLPPWDLP VKINELSRIK 60 SDGDEWFFFG RLQNKYPQSN QARMTNDYGS WKPTGKPHKI RTQDRKNTLG LKKILVFKKR 120 QSPKNAHTKW VLHEYGILND Q |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-26 | 4 | 135 | 13 | 138 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064391.1 | 1e-89 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_010064501.1 | 1e-89 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_018725712.1 | 1e-89 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059DC64 | 3e-88 | A0A059DC64_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064391.1 | 5e-89 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 9e-36 | NAC transcription factor-like 9 |