PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC002771.20 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 187aa MW: 20795.4 Da PI: 10.1739 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.9 | 3.8e-32 | 121 | 178 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYeg+Hnh+ EcC002771.20 121 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGDHNHP 178 99***********************9988****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 3.1E-18 | 72 | 117 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 2.0E-34 | 107 | 179 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.274 | 114 | 180 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.45E-28 | 117 | 179 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.9E-38 | 119 | 179 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.9E-28 | 121 | 178 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006508 | Biological Process | proteolysis | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005516 | Molecular Function | calmodulin binding | ||||
GO:0008234 | Molecular Function | cysteine-type peptidase activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
QQQMKHQAEM MYHRSNSGIS LNFDSSSCTP TISSTRSFIS SLSIDGSVAN LDANAFHLIG 60 AARSSDQNSQ HKRKCSGRGE DGSMKCGSSS RCHCSKKRKH RVKRSIKVPA ISNKLADIPP 120 DDYSWRKYGQ KPIKGSPHPR GYYKCSSMRG CPARKHVERC LEDPSMLIVT YEGDHNHPRV 180 PSQSANT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-21 | 112 | 181 | 7 | 75 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00284 | DAP | Transfer from AT2G30590 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010038933.1 | 1e-137 | PREDICTED: probable WRKY transcription factor 21 | ||||
Swissprot | O04336 | 2e-98 | WRK21_ARATH; Probable WRKY transcription factor 21 | ||||
TrEMBL | A0A059D2M1 | 1e-136 | A0A059D2M1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010038933.1 | 1e-136 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3567 | 28 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 1e-70 | WRKY DNA-binding protein 21 |