PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0785s00002.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family Nin-like
Protein Properties Length: 380aa    MW: 41201.7 Da    PI: 7.4525
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0785s00002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK50.15.5e-164292252
                RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                          e+++ le+l+++F +   +AA++L++++  LK  CR+ G++RWP+Rk++sl
  Dusal.0785s00002.1.p 42 EAQLGLEELREHFFKLRGEAAQCLQISVNCLKAVCRRAGVERWPFRKLQSL 92
                          57999*******************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151913.66328113IPR003035RWP-RK domain
PfamPF020423.5E-134592IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MCRTISAPSF TIDAKLLEGP CPMNEVTPEV NSSGEFRTCK LEAQLGLEEL REHFFKLRGE  60
AAQCLQISVN CLKAVCRRAG VERWPFRKLQ SLVSLTQGDR LAPQEQASIQ AEIEQVLANP  120
NHEVSSKLVK MKLTRYKERY KERMMGGGTM QASRPRTAKR KVIKSQSNRV CNPESGARVR  180
GAPGDRLFQG PAHGSQDAEE GEKDASTQAQ SRGSADQAML LKGRMGPQRP LLPAKADSAA  240
LQQQQQQQQQ LQQPPGECGL MLCAGTLLSS TGEPSSPEPS WASRLFNPHH APQPAPLHAH  300
VFPSLDGSSA SAQGAVSNEG LRQQTPLLQP PPLHDLLDAL DQVQGPPGLD EFESAFFMPD  360
SISRGIDALF DNGISMGLV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.11e-07Nin-like family protein