PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0509s00011.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family G2-like
Protein Properties Length: 416aa    MW: 44873.8 Da    PI: 7.7685
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0509s00011.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like84.79.9e-27345397255
               G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                           +rl+Wtp+LH+rF eave+L G+ekA+Pk+i++ m+++gLt+e+v+SHLQk+Rl
  Dusal.0509s00011.1.p 345 ARLVWTPQLHKRFEEAVEKL-GHEKAVPKNIMQEMNIEGLTRENVASHLQKWRL 397
                           79******************.********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.81E-18341401IPR009057Homeodomain-like
PROSITE profilePS512949.406341400IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.5E-25343399IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-22345397IPR006447Myb domain, plants
PfamPF002492.8E-9347396IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MEDTLVPLDA TLFNASLGKA FGLPGFGTTT TARGGPPPPP PASASWAGSL QHQQQGPFGA  60
GAGSKPVAIW GGAAKEELLR RSTQQQQQQQ QQHQQHQQQL PSFPLLQPEL PLPAVQQSAV  120
SGMAGLSVGS SGQHQQQLLQ QQRSSFDSGM AAALQQQRSS LEAAQQRPSF ESVVAAAQHR  180
PSFESVVAAA QQRSSFEEGV AAAMQQQQQQ QQQQRSSFEQ QQRASFEGGV AASNQLFQAQ  240
QFMAAQASFP HQHLNSIQQS VPLQSFNPFG PLQMPGGLDF TQQGLLAGCP PAYCKPPPYQ  300
QQPVGHASST GTTGTDMTEE DDEQGHETRN TKGPSPGSAR TVKRARLVWT PQLHKRFEEA  360
VEKLGHEKAV PKNIMQEMNI EGLTRENVAS HLQKWRLLEK KNGRGSTEGR TDASC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A7e-21344400157Transcription factor LUX
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1111645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.11e-25G2-like family protein