PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0415s00011.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | GATA | ||||||||
Protein Properties | Length: 5428aa MW: 565373 Da PI: 6.6892 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 23.8 | 6.4e-08 | 729 | 762 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+nCgt +T+ WR + + CnaCG y+r +g Dusal.0415s00011.1.p 729 CANCGTGSTSVWRTDRETGLVRCNACGQYWRTHG 762 ****************655559*********997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57716 | 5.7E-9 | 723 | 772 | No hit | No description |
SMART | SM00401 | 0.0012 | 723 | 774 | IPR000679 | Zinc finger, GATA-type |
PROSITE profile | PS50114 | 14.655 | 723 | 778 | IPR000679 | Zinc finger, GATA-type |
Gene3D | G3DSA:3.30.50.10 | 1.4E-11 | 725 | 771 | IPR013088 | Zinc finger, NHR/GATA-type |
CDD | cd00202 | 5.25E-10 | 728 | 778 | No hit | No description |
PROSITE pattern | PS00344 | 0 | 729 | 754 | IPR000679 | Zinc finger, GATA-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009846 | Biological Process | pollen germination | ||||
GO:0010208 | Biological Process | pollen wall assembly | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048655 | Biological Process | anther wall tapetum morphogenesis | ||||
GO:0055046 | Biological Process | microgametogenesis | ||||
GO:0071367 | Biological Process | cellular response to brassinosteroid stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 5428 aa Download sequence Send to blast |
MASRGRKKTG FPEELEGLSG PFHDNVKRFL LRNAVSVAVS GIEGCSAWVI RLVDLATAEE 60 HNRGGGASSA SPLSSRVLLH VYEERLVEGS NSVCDQCRNM GWQDHPVSNC KYHFIIPGKD 120 VLADPKQLPS LVEAVVTKRG ARNQPATVDL AHLLAKQRGD DTTFNAPTSV YDSPSHYLHG 180 VLHMNGYGHL LRINGKGGGS ERLSGKQIMN IWDGLCTMLC ARQVSVEDVS SKSGMLLRML 240 HAAAHELTWY GKWGYRFGRG AFNIHPDEYH EAVRDVHNAP LSALAHDFQD VDETIPRILG 300 RYASATSGLP ALEHKPHTEQ PQQQQLLPQE RSGHQQQQQQ QQQQQDMELD QGEQQQQQQQ 360 QQQLHLQLPQ QEHKAEQEQE LQVRSPAPDP QKQEQQQREQ EQQDREQQQQ QQQQLVPRPE 420 LHSDASLLSQ QQQQQQLVPH PEPPSDASLH LQQQQQQQPL PRAETLGEVL RRMLDEVSRA 480 GRPRPSIAPP SAPLLPSHIT PANAASAPLA AHSAPQTDAA PPSTTAAQNA RTASSVVPLR 540 SLHGWGILPP SVHHHGGPAT AGDVHMQQNR PPSSRAVRTA AHALTASPSH TARRTLSASA 600 EPGSDAGGLE GEEEVQRNRG AARRHSSRQP HQHQLAGSGD EAGMDGVDRS QMQATAAVAA 660 AGAAPRRVGT GGRLRRPSGS KEEEVGEEAA QQQQQQKQRQ GAGGMPWRKG STMSSRKAST 720 MPPGDQTTCA NCGTGSTSVW RTDRETGLVR CNACGQYWRT HGYERSMDLL KGAQLKSKGA 780 GHDARGPEQQ AQPQEQQHHQ PQPRGTVPSG GMQKAVRAGS HDAGAGGRVV RQSEGMPRRS 840 VEASGEAVAG EGVSVEGQNV ALPRHGCKRG RAEAEGGLSV APDNMAEAEE GAEVRAAEKD 900 GGGLPANEAP GRESAEGQGA DRLSSEQEGG VELGGEGPAS TPQPQPVPGT GGADHGHTEE 960 CAMEGEGEQE GSHAQEVRGQ EVSHAAANAG VALGEELVLG IKGEATRGQK RPLELAVGEA 1020 EVPEQGLTQE RQTRQRVQQQ LVQEQMCEQQ QQQQQQQVCE QQQQQPMQEQ VCEQHQHQHQ 1080 QQQEQQQQEQ QQQREMDQQE QVQLTKSPML GDDCQQQQQQ QQQQFEEQQM HMDVMDPHPH 1140 GPQHSHTQQQ PRLQQRYFPS ALHPEMETEQ HYSPLMPAWT HGTLHQQQQQ QQQQLQEQQH 1200 HHLQQLQQQE QHPVPHPPHP PAHSPSHKQT PEQQQQQQQQ QQHAQPSPPP PSSRISPSQA 1260 PPEQQLQHHH PSSPLAPPPH SSPSQASPEQ QLPHRHPSSP PPPPSRSSPS YAPFEQHLQL 1320 QHNHPPSCPS PFRGPPEQYQ QLQHHYLPSP PNPPSRSSPS HAPPEQHQQL EHHDHPPSPP 1380 PPPAGSPPLE EPPDEPPGDH DSYVPRPLLP SDGGSLAGSV AGSLGAAVEP PGYVPRPLLP 1440 SPPDEHASAS PPSAVHPPPE DQHMQPVDEL KQAAHPGSPH EQEHAAHPSS PRPSLPADES 1500 SGQHPSPTPP PVPPSPLQHQ PQPLMEQQQQ QQQQQLLSGA PQPDAAMKEE AGQQQQQQPP 1560 PQPTPSQREP QPPPAWDAPS LQHSDPYPSE ASMQQQASQP HIQLPPPPPQ PMPAQQQAPS 1620 QAQPQQHTSQ SDLAGEHAPS ATAPDAAMED TVLQEAPPLQ QQQQQQHHHH HHQPAHHIPS 1680 HTTPGLSPIN TSPAAAPMRA TECTAFCATA AAHACSSQDQ VPMETDPAPS DVAADAGHHR 1740 EQAAMQPGTL GGVPQDVTYD AGHPDLAPGN VAADAALHAE QAVTQQGTQG RIPMDATTLN 1800 AGHPDSAPGD VAADSGLGSE QAATQPGTSR CIPMDATPDA GSPEVHLNQG LPSSQAAGQV 1860 RKSGGLQRVK NQVGEEQHAA GLAGKQQLVD GQDGEQQRAQ GLQGKQQRVE DQEGEQQGFE 1920 RQEVEQQQAG GQEGEQQQRE GVQGKQEHVE GQESKQQQEV EQRQAECQEV EKQRAENQGG 1980 HTKHVGARGG EQQQQVEGQR GEQQQVENHG EEQHQQQVEG QGDQQQVEGQ GEEQQHGEGQ 2040 GEEQCHERGT TEPGQLQQSA TAAAEPQQPD AALGLARSVP ALEPQQHAGP TSAVAAAAEC 2100 QPPDAALELA SAAPATEPQL HAEAPSAAAA AAAAAAAECQ PPDAALELAS AAPATEPKLH 2160 AEALSAAAAA AAAAAAECQP PDAALDQAGP APALEPQQHA EPTSSVAAQA AAPPAAKSPS 2220 PEALAAPADP APAKDTLPPP EAAPASAAGA APPAAKSPPP DAPAAPADSA PTTEPHQPSE 2280 AAPASAAGAA PPAAKSPPPD VDPAQTGPAP APDPQQPSEA APASTTRSAP LAAEAHPYAG 2340 PEPAAGKVGA SSVPQQPPDA AAASAAAEAV PPTGFQQPPE AAAAGAKAPQ SPPPTEGLPS 2400 AAEPGAADSG VGEQGPPSTQ QPAAAVAAAA AKPQQVKAKA APKGKGRQQK GKGRKQPATE 2460 PPTQAPPLLQ QQQQQQQQQG PPQEDLHQHE SQQQLQQREP QSESLQQEPQ PEQQQQQQQQ 2520 QQEQAEAAVE EAATGQGPKT GDHLPLQPQS QQGQQQQQVA QALGRAGPDS AELQQEQQQQ 2580 QQQPLSGALQ PDAALKEEVE QQQQQQQQQQ QQGRGGRQTR KAAPKRSRPA PKGAATGSAA 2640 AAAAAAAAAG AAPESEQQHG TDERPPQVQV EAAEPHARGE QQQQQQQQQQ QEQPPQPKRG 2700 GRSHTATQGA PPEEMAAGTL AKQEVRPQET AGGTQGEGDA GPAPFRGAGA RVVAEEAELE 2760 AQAALPTQTQ EQQQQQLKQE GPSGARKKTG SKAQAKSGPL SAEVQRQLDE ELQQQQYPPP 2820 AQLPKFAYPN EMGKRPFTQD RQQKYTQTVH LVLKEIPKAR WIHRSALLAA LIKHGMADKL 2880 ISSLTMTRLC GAVLDDMAVY RCGKTGQIYY KVVQLDALGN PSSGNQSAAE ALAEAAPAAA 2940 VHTPTTASGA AAAGPSARAM SMRRGGGKKS AATEGPSSPA ALPDSCPLSS AAPGVAGGDQ 3000 QQQEQQQQPD TAAHKQSRSS AGGEQHGQQQ QPAAAAHKQS KSCTDRVARA KAEPRKGWRF 3060 SSRFGGEGGG VMDPGDSEAA AIAAVAEHEA KEAAVAAKAN AEAQSTAPQQ LPPRAEEPPG 3120 AEDAAEPTTG ASNGAHEAAP PVPSAPAAEV EVGPVGTAPA PAPAQAAPAT GPAAPTAEGE 3180 EPEAKAAAAT ATATAAAAPA PATAPVATVG GPTQEAGGSD AGGTVDAAGP AQAHQPAAVP 3240 TGPARKGGQR NRSRASAKTS RTSAATRSAG GTQGGAQGGV QGPAAEGGSQ GPATGEGVQG 3300 AATTQGAPAG VQAQEGPERG AAGAPAGLHK DPGAAATGTG ELDAPPAATP ADAAAARAEK 3360 DGIAADHERQ QPLAAAQHGD AAVTQPGASA MPVSDAQHGD AQHGDAAAAA QATAGARPLE 3420 TSAPAPEAGA PAPASDAGGA CAVTETHTAA AAATAHSNAA AAAAAAAAAA AAAVADPEDA 3480 AAQGTQSLTT QEGSAVLPGG EAGAAAPPPP VEAAPVPAAE AAVPPPAAPA AAAAALPPAA 3540 PAAAATPATG SGVAAKEGRS GGSKGGSAKK GGGSRVRRSG GGVRKRAGSS QRQRAPKLLL 3600 QQQQQQQQQQ VVQGTEQPPP QVPANEHEQQ QLQQQPQAVP LAEVVYHPKS RVSKRELQAL 3660 NAHQVRDASQ QYRKLAQRAT NKQQAKLAKQ GARCSSHVST PTHSTQHQPR APPSGQQRQG 3720 KQQQQGKQQL QQQGKQQLQQ QGEQQQQQQQ PKQQQRGNQL QHQQQLQQLQ QLGEQQQPEQ 3780 EHAEPVQQQP GGEDMAQGLK LKQNAEQTMQ QQQQLPPPPP PMVPIGAEAP AGEGAATAAG 3840 ASTDAGGTSM SAAGEAGTGA AGAGVADAGA AAAGTEGVGA AGAGAEGLGA AGAGAAGAGA 3900 AAAGEARAKG PQAEVTEGGP RAADAAGPDI AGAASGGAAG AAGAAGANVL SQPPSAPARP 3960 RQPRPRASGH KSRGRTTPKS RSGVRRVSAA AAPAPAAAAA TPQQVPIKHS VAPPPAVAAA 4020 QAPAAAATPQ QEPMLPVGPP LAVAPAPAEP EHSMQPPSAL HGPVDPKHSM PPPTALEPPP 4080 QPQHSMQPPE ASQSAPEPKR TTQPRFSMRF VPIPTGDIVP KPAVVVQGAP VAAAAAPAWP 4140 APAAAPAAAA TSIGRSTTRA AIRAAAPDAA PADDGAHIED GSMLLRQPQQ QQQQQQRQPQ 4200 QQRQRQPQQQ RKQRQQEPKQ QQQQQQQQSL MPPPPSPSHL VQGGSLPLKQ QQQRQSLMPP 4260 PPPPSRLHQQ APPLAGSHPL QPEHPAHDAA AGRPPPGAAP AHNVALATPP NEAAPPDEAA 4320 PPTQPPISQP PCAGTTAART PGVPLSAPDS THSAEASAPP TQSQHHQPHR HPQQQLEQQQ 4380 RRTERRAERR MQSPRSPHRE HRQERELQQE HRAEQSTQPP QVHQQQRQQQ QQQGQEQQQQ 4440 QGQEQQQQEQ HGVHVMQPSQ FLQQQQQQQQ QGQQEKHSMP PQLPPPPPPP PPPQQQQQQQ 4500 QQRGSQRSRR ATQRWYSEEE NAHAQLCAEK TPAHTPHAPQ GTANTSGAPL LGGSIGGSSK 4560 VPQPPGPPGP PQPPQTARIP SAPSRKIRIF APSARRSAQS SSKPGLPHTP SSTPHTPLGT 4620 ASATPQPHLP SPPAKPPTSE AGAGVGALGT GVSQPSSLEL LAKTSKPRQP KGLAYQPTHC 4680 PQCGTFVKQH RYLERHMKTQ NCLASAQARA QGLQGGALMG EGGGADATPA GPEAASQHAT 4740 HAREGGGGPT AAGPGALVAG PGVPYHPGGK SLAAKIREAA RRNVSKAAAA AASVAAPTAA 4800 APAAAAGESA QEGNKSAGAA PSAGDAGGFP PTAQGLGFVL PPGAVEGSRG VVTGAHGTVQ 4860 RERGSERPLK KRRTKSEASR LVAAAGKAIQ GGAPAGKVVQ GEAPAGTAYR GGVPAGKVVE 4920 GEAPAGTVFR GEAPADTVTQ EAAHEAAVHG DLEGMEGPPK KRRAKSEARA YLGEALAGRV 4980 RIGATEEGEQ GIGVPSKTAS RSGAGGERGL ASRVGIARSE RASARRSAGL AVRDSGRRRS 5040 ARREAAGGVG RRILLGLGSD DDDDGSPARS EGYERVYTHR RTPATAPPAH RGSAAVPSRA 5100 AADGSRTGGV ARVTKGLKGH AIRINDSATP PINPRRASNP RIPAVALAQP EEPSESEGDE 5160 EQTLGPEARR ARTLALLTER HAAGRPAPTA AWRVPPRSIG DPHPFLRSIP LMYLTQASGG 5220 WRRRDEEGKL QGHPPLESDK EGKLQGHPPL REYQPVAAAL AKAGPAAARS VATATAAVSA 5280 AQLSLPQLAS SLQIIKDTKY FVKDYGGPFR VPLPACMDAQ GVVPLRLQCQ VRLPQHMESH 5340 WPALPGIRGH MSRPRLLALT PPEPIIFPAT DVASKRTTLA DFCRWGAWFC MKAPWRAPNS 5400 PQNIVSPVTG IVSKKTVHAD FACAQWH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4959 | 4964 | KKRRAK |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0415s00011.1.p |