PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0387s00007.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | MYB_related | ||||||||
Protein Properties | Length: 826aa MW: 94170.1 Da PI: 8.9956 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.4 | 2.4e-11 | 770 | 817 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 g WT++ ++ lv a kq+G++ +W+++a+t++ g++ +c r+ + Dusal.0387s00007.1.p 770 GQWTEDQELALVAALKQYGKElsdRWDRVAETVP-GKSKVECFKRFKEL 817 89********************************.*******9999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.287.110 | 2.2E-20 | 111 | 202 | IPR001623 | DnaJ domain |
SuperFamily | SSF46565 | 4.06E-20 | 111 | 187 | IPR001623 | DnaJ domain |
SMART | SM00271 | 1.4E-17 | 115 | 183 | IPR001623 | DnaJ domain |
Pfam | PF00226 | 3.3E-18 | 116 | 188 | IPR001623 | DnaJ domain |
CDD | cd06257 | 5.13E-13 | 116 | 180 | IPR001623 | DnaJ domain |
PROSITE profile | PS50076 | 17.893 | 116 | 191 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 3.1E-6 | 121 | 139 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 3.1E-6 | 139 | 154 | IPR001623 | DnaJ domain |
PRINTS | PR00625 | 3.1E-6 | 163 | 183 | IPR001623 | DnaJ domain |
PROSITE pattern | PS00636 | 0 | 168 | 187 | IPR018253 | DnaJ domain, conserved site |
PROSITE profile | PS51293 | 7.267 | 520 | 573 | IPR017884 | SANT domain |
SMART | SM00717 | 1.8E-6 | 521 | 573 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 3.36E-7 | 524 | 565 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.81E-4 | 524 | 564 | No hit | No description |
PROSITE profile | PS50090 | 8.571 | 764 | 818 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 3.0E-6 | 767 | 817 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 3.5E-8 | 768 | 820 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 3.66E-10 | 769 | 817 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.1E-8 | 769 | 817 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 9.55E-7 | 772 | 817 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 826 aa Download sequence Send to blast |
MCTHLPVRKK GGVRLLGWPA ESTETVVVSS AAGPLSIGHK EPAGHLFHTA ILKQHGLFQY 60 PPEEDEEDKG SNKSGSSGGD KQEKSTGAGL DDQPPPGVNW KGSKKKKTKG KKEGQDLYLL 120 LGLQNERFMA TDNQIKNAYR RACLEHHPDK KLTQSESPEE KQRVEDHFKL IQEAHSVLSD 180 PAKRREYDST DHFDDSLPLE CDPADFFKVF GPAFRRNARW SVDPKVPDVG DEKTPYDQVE 240 KFYNFWFGFK SWREFPHPDE EDTEGCESRE HKRWLDRQNA KLREKGKKEE SKRLKEFINA 300 AYSMDPRVIQ KKENDRLERE RKKQAKEDAK RRAVEEAEAK VAAENAARQA AEEAEKKRNA 360 EAKAVREAEK NTYKKERQRL RRLCDGHGQR GAHACCLVIR TWPTWSTCML FVDQGMASVE 420 RMHAAWRSGH GQLGAYARYR RRLLAHCAGV ACLSERLGMQ SNLSGRHATP TRGVPAVFAY 480 KLCRSSEVLL LEIRTLQFVQ YWEHALVSAE AEREHQRKME SMREWSDEEL RMLDKAVAKF 540 PQGTPKRWEV VAAYVRTRSL EEVVFMVKEK QGMTAGRLKA QEDFRANMKR KAEVKSEADL 600 RINAFTDLNI SLAGDAASRL NESTLVKSAG EANGEEQGPG AGPDSEQTAA AAEQQQEQEQ 660 QQQQQQQQQQ DQQQQQQKQQ QQQKQQQQQK QQQEQKQQQE QQQRQHQQEQ EEQQKQKQQQ 720 EQQQQQKQQQ ESRAAAASQE AKANGSGGGK SGAAPEKKGN AVVATSAETG QWTEDQELAL 780 VAALKQYGKE LSDRWDRVAE TVPGKSKVEC FKRFKELREM FGKKK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5dje_A | 8e-16 | 205 | 308 | 20 | 123 | Zuotin |
5dje_B | 8e-16 | 205 | 308 | 20 | 123 | Zuotin |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002953749.1 | 1e-123 | asymmetric division protein GlsA | ||||
TrEMBL | A0A383VE96 | 1e-129 | A0A383VE96_TETOB; Uncharacterized protein | ||||
STRING | XP_002953749.1 | 1e-122 | (Volvox carteri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP1184 | 8 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 1e-74 | DnaJ domain ;Myb-like DNA-binding domain |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0387s00007.1.p |