PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0376s00012.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family MYB_related
Protein Properties Length: 824aa    MW: 88991.3 Da    PI: 7.0027
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0376s00012.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.71e-11128169345
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
       Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                            W ++E+ ll++a+  +G+g+W ++a+++g ++++  ck +++
  Dusal.0376s00012.1.p 128 EWGADEEILLLEAIDIYGPGNWGAVAEHVG-NKSAAACKAHYH 169
                           7*****************************.***********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM002918.7E-765109IPR000433Zinc finger, ZZ-type
PfamPF005692.8E-569100IPR000433Zinc finger, ZZ-type
SuperFamilySSF578506.95E-1269132No hitNo description
PROSITE profilePS5013510.59969112IPR000433Zinc finger, ZZ-type
CDDcd023352.15E-2469117No hitNo description
PROSITE patternPS0135707198IPR000433Zinc finger, ZZ-type
SuperFamilySSF466892.69E-11121173IPR009057Homeodomain-like
PROSITE profilePS5129315.492124176IPR017884SANT domain
SMARTSM007173.1E-9125174IPR001005SANT/Myb domain
CDDcd001675.58E-10128171No hitNo description
PfamPF002494.4E-11128169IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.7E-8128171IPR009057Homeodomain-like
SuperFamilySSF466892.87E-19700786IPR009057Homeodomain-like
PROSITE profilePS5093410.191701796IPR007526SWIRM domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009631Biological Processcold acclimation
GO:0009733Biological Processresponse to auxin
GO:0009735Biological Processresponse to cytokinin
GO:0042127Biological Processregulation of cell proliferation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003713Molecular Functiontranscription coactivator activity
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 824 aa     Download sequence    Send to blast
MVEAVQVAAL SACHGCVPCR KEGPNCAHSW RALYHCNFCQ KDISSCPRIK NSFCPDFDSL  60
SPCAHRALYH CNYCQKDISS CPRIKCAICP DFDLCLECFA VGCEITPHKR DHDYRVVDNL  120
SFPIYHPEWG ADEEILLLEA IDIYGPGNWG AVAEHVGNKS AAACKAHYHE IYIHVETYPL  180
PKPSPAMQNR PSKKGRTSSA PAPAAPPAKQ PMNPAALGPT HLKQEVKEEK PCPTTLQDIK  240
VEQREREAEE EGTAIANTSP QVAMDVDSKH LEGEHLTQAR EPEDYFKGQK AAAQGMKHVA  300
HAKAASKKEP KTEDQTHQTA ATGRTLHGDN AAPAAPPSKA NPEGSQGPPD QASGFDVTGY  360
HAKRREFDPE YDNDAECVIA DMEFTDADTE EDRQLKLRML EIYNKRLDER EARHDFLAEH  420
GLLNMRKVQA LDRRRTGPER DTHAKLRVFA RYSAPAEHDN LVEGLLLEQR LRSRIEELKE  480
NRRQGARTIA DAEAMESDRK QKAKGQAQPS TQRAAGSSWS SLPPLGVTPL PGPTPFPTAP  540
SPYFPAATPQ RNFHDNFAAP GTMPLPLLSP LPPANAAAPP SGPAALTAPG AAPPSAPAAA  600
QPLGNTASTA ATPQGSEAAA AQSLGLPVAG ARLQGILAGA TPVAAAHPAE GGHHHQEATK  660
ALVLQRMNKP YLASPSYELA ISFFVAPPPG GNKGAAAALA SWRTRRGVAL DISCMPGVEL  720
LGARERELCA TSRLHPAHYL ALKDMMLRDC ARHGTISRQE ARTFFRLDAS RSLRLYDLWV  780
QLGWVSAPAT QKKAVSGFAG ETGTMAGAAT RAASEDGDFE ETI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6cw2_C3e-30691815117Transcriptional adapter 2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A250XHS11e-121A0A250XHS1_9CHLO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP187466