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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Dusal.0370s00002.1.p | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 2721aa MW: 282864 Da PI: 9.0333 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 23.8 | 1.1e-07 | 1434 | 1477 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
W++ E + + d++ q++++ ++tIa+ ++ +Rt+ +c+ +++k+
Dusal.0370s00002.1.p 1434 QWSEAERKVFMDLFLQHPKE-FRTIASALPGNRTAGDCVAFFYKH 1477
6*******************.**********************98 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF46689 | 8.25E-9 | 1426 | 1480 | IPR009057 | Homeodomain-like |
| Gene3D | G3DSA:1.10.10.60 | 8.7E-5 | 1429 | 1479 | IPR009057 | Homeodomain-like |
| PROSITE profile | PS51293 | 10.81 | 1430 | 1482 | IPR017884 | SANT domain |
| SMART | SM00717 | 1.1E-5 | 1431 | 1480 | IPR001005 | SANT/Myb domain |
| CDD | cd00167 | 0.00849 | 1435 | 1477 | No hit | No description |
| PROSITE profile | PS51293 | 5.356 | 1743 | 1791 | IPR017884 | SANT domain |
| SMART | SM00717 | 12 | 1744 | 1789 | IPR001005 | SANT/Myb domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 2721 aa Download sequence Send to blast |
MGDRRFPLRG GFHGPGPMFG PPGMRGGGGG GRGGPGWRHE PDFGPPVGLG RFGQPPPFLP 60 FPERERARAF SPPGLGRYGP PSNGPPAGFR RPDDGFGGRR FIGGRDDHLP HHRDYGPPFE 120 PRMGRGGSRG PGGGGGGWMP GAGGGSTYQE RSRSAMLMRP RSREPSPPYP VASDLLHPLA 180 RPQLPMSASR VGGSSFSDRE RLRELERARD RSRDRELNPP SSISHSSRSR SSSHHVSRAH 240 SMDGHHHHHH HHSSRVHSPS RSGDGGNTTA EAGELLPPPL VSRKPSGSHK AAAIASTGSP 300 PPSLSSTPRE CTSAWDLRPP PPASAAAKEP PLQPHVRSTN SGSKHGMPPP PSTTLPPDAP 360 HAPSASKPGA PTALSRSTSV PSQNGPSSSS ADPSSTLPLP PHMLGIGGRR EQSTARRPPS 420 PPLPPPPPPV PLPPAPSNRS SSRGQLHGSS CSSAPHKTPP SEPTSPRRSH STRQHQPPLP 480 SHIPPQAGPT SESVAAGAVS HLPLPSSSAR AQAPCLPRPV EPPDAGLPNM VWDIRTLADA 540 PDALGAAANA QQQQQQQEPL QHHAWEKAEI GFGSNKGHPH EEGPLHGPPT AESEKLVTEG 600 ALACAPQPPS AAPPACLPPA MRAASGVMDH TLPPPPPPPP SHLQHRPSTT ARAESGNAER 660 PLPSASPWLG APANTLLLKP QRHLSSSMDP LSDSAAAAQR SSPAGLSRSG GQGAWEHANA 720 SSSMLGLPGS LPWQHSLSQL PPQQQQQQQQ QQQQQVPLQP QPQPTPAPQQ NRRFGFGISR 780 RGSSMAKVGD SLGATGEGSN GSNTAAAAAA ANTQQRPAVQ SKQQQQQQQQ QHHHHHHQQQ 840 QQHQHQQQQH SGTAAWAAEQ QKGEGVLEKA SDQAANQPGA AHQQAPHTQG AATTRASTPK 900 HTSGADAARA QGGELPQVKE EWQGVEGKGV ATASPSVGGM KPEGKCAVAK KAVQELQHKM 960 QQQQEELEEK QRQQRQKEEE DRQQQVRKEE EEKERQLQRQ RHREVQQQEE KRREHLEQQQ 1020 QLLQEEHARQ QQQQQQRHQA ALELSARIEL LEAEISGLDT DVSSMQHQRT CMGSRMEELE 1080 RIAAASNAQQ FAAQQLSLEQ GPGGRGSSSS SSSSSGDASG SEEEDEEGHV SSGGSSSSAS 1140 SSDGSVSEQE AAAPEPVFHE GRGRGRGRGR GRGGRGRSVA APVRAEKRRS RAHKVLLPAK 1200 VEAASYMQLS SSQTESRLVE SSRETARASR EKVLALLPDD MAEQVRTSLE SGKPFTPLYT 1260 QPQSIPSWEA SEAAHEAQAP ALGAHLSMRA AAVRAKQSAL AALYTQHVAT LKRTLAESKA 1320 GANAGSEDDS QPQPPSTTPG GPAGLPQTPT NITRSSSRLC SAGSLAGMFG VARSDFDEQR 1380 ILSNLQAVEL LKEVTVMPDM ELDPWQARWQ AFDNRNGLNP DPLAELEARQ KSRQWSEAER 1440 KVFMDLFLQH PKEFRTIASA LPGNRTAGDC VAFFYKHQKL DEWANVRRKQ QLKKRKMNCD 1500 AKRHMVSPLV LAPIAKARGM QQQQHQQQQQ QQQQQQGTYA CNPPLDANHH SAFNSPLTRP 1560 ATAPPTAFTD FTPAPPPPPP SNSYPHPHST TLHHNHTPPH ASALANGVLH AAFPPPPTST 1620 RGRGRGRGRT RAPPQVAPPD HGPPLPPQPP VQGGGTAAHH AGSSTVPSTV QAGLGHLQGM 1680 PAAGAGAGGG GGVGGGAGGV VGGLTGLLMG EGDGNSQPAA AYVNSLPPRS TPDTAGALGR 1740 SGNSNGGWTE GEYVECVRAH GRDFRLISQQ LNMRTESTAK HFYYKNRHRL GLEQVLRDRE 1800 EGLPGAAKQA SRGGNALASP PAGSCGAGVQ LMRTLAQIQC VWYVASAQGL PHNSLRHSSL 1860 LSSLHGTLDD TSAALLLSLH PPQSSPSPAL HPQLFVQGLG LHTPQQLPNA HLPSLPHSHH 1920 PHHLLQQQQQ APAAAAAAAA LGSAAATPWM LPHLLLPGAA FMEQPQLQQQ QQQQPTSFQG 1980 LLGHLSAPPG AVLHPPHSQS QGPGGPGSSS SDCLASPPGI PLHQNSQGLS QERGSSHIRQ 2040 GPVVGLGEGI GGWGGAAGSS VGNQVPGLGV GEGVGGSAGA GSWGSKPGGE GGNAGGKGSS 2100 SAASQSQGQS SCNGPAMGIP TVLDLPLLDA GSIARHAAAA AASSGGPRKP LSSGVMPPLF 2160 QPTSSSPGQP TGSQPTPSAQ QPPQAAGAAS PSPQPHVLEA VLHQQACLAA LAPPTLLPHG 2220 LFGHHTNAPT NLLQPPQRKL PSPSVPPAHH ASTPLMNSLL ELSMLSPTLP SHAHIHPPPL 2280 FAASSSNRPL SHSGDSTAPP LTSAHKTGGL ECGGTALGVP RPPTATTLPS APDPAAAAAA 2340 AAAAAAAAAA FADSSGGHVA PDKMSCMGEG GSGNASVSGS AMLPTPPPSA ASGTAAAGGE 2400 ESRAKVRARS REEDLGGTDA GQEDGRPLKR QALSLPSTTL ADQTHLSPPT QPSLTQLLLG 2460 PQLGGSSSAP HLKAPPAPSA VPAPVACDTG MPSISNTPLP LDVASLPGLL HASLAPESQQ 2520 HQLQQLRDLL KGQRGGDETP CAGVDLLLKG QCSGDGTLRA VVDPLLKGQR DDVVPCAGKD 2580 LLLNAVPPSA SAPGGILLPA APVPHHDSQH LLTGPPRPES SNFPSGHQGP LAGAGGVPGS 2640 HPLFTADHPL LATGHPLIGS HQLASCVPGH QAGRDVPSAP LSMGSQALSV LDALECSSAT 2700 PESMAAAVLK DLHAGRQSAN * |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 1163 | 1172 | RGRGRGRGRG |
| 2 | 1620 | 1630 | RGRGRGRGRTR |
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Chlorophytae | OGCP2883 | 10 | 10 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G52250.1 | 2e-12 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Phytozome | Dusal.0370s00002.1.p |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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