PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0336s00015.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

GATA

Protein Properties

Length: 683aa MW: 72204.4 Da PI: 8.294

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0336s00015.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.1	7.7e-16	82	116	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCgt+++p+WRr + +++ LCnaCG+y+ ++++ Dusal.0336s00015.1.p 82 CANCGTKDSPQWRRPSTKKIVLCNACGIYFSRHNT 116 *******************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50114	12.796	76	115	IPR000679	Zinc finger, GATA-type
SMART	SM00401	1.5E-11	76	127	IPR000679	Zinc finger, GATA-type
Gene3D	G3DSA:3.30.50.10	6.7E-13	79	127	IPR013088	Zinc finger, NHR/GATA-type
SuperFamily	SSF57716	5.7E-11	79	125	No hit	No description
CDD	cd00202	3.39E-12	81	116	No hit	No description
Pfam	PF00320	2.5E-12	82	116	IPR000679	Zinc finger, GATA-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence Send to blast
MECSMEGPSR THALLETVRK LLEMQHEEEE IPTVKGGLCE ESTFAQESLC SGATPTAEEL 60 IVAVPTNKKR SVQRQGVPGG PCANCGTKDS PQWRRPSTKK IVLCNACGIY FSRHNTLPQR 120 SSNNSSSSNK KKTSSAVPAQ VPQVQATQDV GNESAGGEDE AITAAGPTHH MALLQQAACA 180 AAAANEGPYT RRPSSHSNTS QTDVINMSQS SRRSSPSRPS QEEDEVMLDN LPAPPAAAVK 240 QEDAAAAHSQ SSTQQPVPIP AVPSRKRSLR AGSTSAPTST PTASATNPTF SAPNAPPPPQ 300 APAFAAHPQP WGPHPSQLLL LQQQQQLLHM RLLGGAFPTP PNPYLMRILA STPPHPQLLA 360 SQQSAHLPSL HHHMQQHQHA LVLHHVHQMQ QQQLHALGGL AHLSSVYTPH GAGLLGRGST 420 GVARGSEAGL SAPTAQQPSA HSRSASREEP IAASLVPPVS VQCQQQQRQQ LHRLITTQPP 480 AWPALPLTEY GNASPHLQQQ QQQQQQQSQQ QQRGADANSR AAQVVEGQAA VTCHLLSPSS 540 QQLLQQQLPQ QQSEEEKEDA ADVQQRLLEP AAKRHQRQGS FGSGPEGATS STAAHTMTTQ 600 GGQGGHSLKV IPSYACRGPR AVSASDATSS VAALQQQQLQ QQLLQKRMAP TAPLLAAGGG 660 GNGSGTAVST MYRPAPCALS DC*

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence Send to blast

MECSMEGPSR THALLETVRK LLEMQHEEEE IPTVKGGLCE ESTFAQESLC SGATPTAEEL  60
IVAVPTNKKR SVQRQGVPGG PCANCGTKDS PQWRRPSTKK IVLCNACGIY FSRHNTLPQR  120
SSNNSSSSNK KKTSSAVPAQ VPQVQATQDV GNESAGGEDE AITAAGPTHH MALLQQAACA  180
AAAANEGPYT RRPSSHSNTS QTDVINMSQS SRRSSPSRPS QEEDEVMLDN LPAPPAAAVK  240
QEDAAAAHSQ SSTQQPVPIP AVPSRKRSLR AGSTSAPTST PTASATNPTF SAPNAPPPPQ  300
APAFAAHPQP WGPHPSQLLL LQQQQQLLHM RLLGGAFPTP PNPYLMRILA STPPHPQLLA  360
SQQSAHLPSL HHHMQQHQHA LVLHHVHQMQ QQQLHALGGL AHLSSVYTPH GAGLLGRGST  420
GVARGSEAGL SAPTAQQPSA HSRSASREEP IAASLVPPVS VQCQQQQRQQ LHRLITTQPP  480
AWPALPLTEY GNASPHLQQQ QQQQQQQSQQ QQRGADANSR AAQVVEGQAA VTCHLLSPSS  540
QQLLQQQLPQ QQSEEEKEDA ADVQQRLLEP AAKRHQRQGS FGSGPEGATS STAAHTMTTQ  600
GGQGGHSLKV IPSYACRGPR AVSASDATSS VAALQQQQLQ QQLLQKRMAP TAPLLAAGGG  660
GNGSGTAVST MYRPAPCALS DC*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP450	15	26

Link Out ? help Back to Top
Phytozome	Dusal.0336s00015.1.p