PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0257s00025.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

CPP

Protein Properties

Length: 882aa MW: 97360.3 Da PI: 5.2292

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0257s00025.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	38.5	2.3e-12	494	530	4	41
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 k CnCkks+Clk+YCeCfaag++C++ C C +C N+ e Dusal.0257s00025.1.p 494 KYCNCKKSRCLKLYCECFAAGHYCDN-CCCLQCLNNLE 530 78*********************9.******975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	4.2E-12	491	531	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	14.068	492	554	IPR005172	CRC domain
Pfam	PF03638	7.1E-9	494	528	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 882 aa Download sequence Send to blast
MPSSLTILPT IQKLIDYLAG LGASPSILEH VRESWDIEVK ARRQGGADIY WLAPGHPGRF 60 SSMVKAAEAL GLQPPKRARP VTHVVEETDS DEGYKQPPQP DFYAFDGVDR PRPKRQTRPP 120 QRTSMDLPLR VPRGRSLPPP SSPPSLGPPS ALPTPLYPAA HPAPISSFSS YPHLNPSLGH 180 PPHGFRPLAP QPAAPPAPPV ELHPVLLELE PVEQGAGGGG DAAAGASFLA EGAPVEWVAS 240 FILHARKNHV RLIDRSGLVL AQQNAFSLQY VVEGGCLRIL PLLEEEPPEG WASLPVATPA 300 DQLGTVFDSE PAYTGASVTA LLRPEQLAGA ESADDDEWAL LDLRVPVGRL AGVRPDGGLS 360 LQDGCVLPAI LAQPQQAAHV HLQPQQPGQE GPGVEMVFHP LEAVLESSRQ QALLVQQQQQ 420 EEQRRLELER QQQAQRKQQL EELQRHRQQM EELQRQRQQL ERLQQALQQQ AAKQVLSDNF 480 LGSSPSATTG VPRKYCNCKK SRCLKLYCEC FAAGHYCDNC CCLQCLNNLE SEPKRQQAMD 540 FILEKNPLAF QSKIKGSEQH VAVRNGTLPP EPKFANWRLG TPPGLMLDST AAADEDAPTQ 600 EWQWQQQQLV MHQQHRQQQQ LQQQREREQQ LQQQQRQQRG SLQIAWWDVA ELEKAMLAQS 660 RNPMLQQQQQ QQEQEQQQQQ QQQQAAEGQA GELQEQQPSP PQQQQQQQQQ QEPQLEQHSG 720 SAAHKTESPL STSLNPEGGG HEQDGSEHPL GEGAPTRDGM HAQGGAQATH AEGEERQGSE 780 GGGSQHQHPD DAQQLLQQPQ AQEPPACEAV PVRPQGSGGQ LEEDHTKGDE QQQQQQQQQQ 840 QQALSWEEQL RLHYQTLSPE KGEPQVARPT VTTAAAPVLP W*

Sequence ? help Back to Top

Protein Sequence Length: 882 aa Download sequence Send to blast

MPSSLTILPT IQKLIDYLAG LGASPSILEH VRESWDIEVK ARRQGGADIY WLAPGHPGRF  60
SSMVKAAEAL GLQPPKRARP VTHVVEETDS DEGYKQPPQP DFYAFDGVDR PRPKRQTRPP  120
QRTSMDLPLR VPRGRSLPPP SSPPSLGPPS ALPTPLYPAA HPAPISSFSS YPHLNPSLGH  180
PPHGFRPLAP QPAAPPAPPV ELHPVLLELE PVEQGAGGGG DAAAGASFLA EGAPVEWVAS  240
FILHARKNHV RLIDRSGLVL AQQNAFSLQY VVEGGCLRIL PLLEEEPPEG WASLPVATPA  300
DQLGTVFDSE PAYTGASVTA LLRPEQLAGA ESADDDEWAL LDLRVPVGRL AGVRPDGGLS  360
LQDGCVLPAI LAQPQQAAHV HLQPQQPGQE GPGVEMVFHP LEAVLESSRQ QALLVQQQQQ  420
EEQRRLELER QQQAQRKQQL EELQRHRQQM EELQRQRQQL ERLQQALQQQ AAKQVLSDNF  480
LGSSPSATTG VPRKYCNCKK SRCLKLYCEC FAAGHYCDNC CCLQCLNNLE SEPKRQQAMD  540
FILEKNPLAF QSKIKGSEQH VAVRNGTLPP EPKFANWRLG TPPGLMLDST AAADEDAPTQ  600
EWQWQQQQLV MHQQHRQQQQ LQQQREREQQ LQQQQRQQRG SLQIAWWDVA ELEKAMLAQS  660
RNPMLQQQQQ QQEQEQQQQQ QQQQAAEGQA GELQEQQPSP PQQQQQQQQQ QEPQLEQHSG  720
SAAHKTESPL STSLNPEGGG HEQDGSEHPL GEGAPTRDGM HAQGGAQATH AEGEERQGSE  780
GGGSQHQHPD DAQQLLQQPQ AQEPPACEAV PVRPQGSGGQ LEEDHTKGDE QQQQQQQQQQ  840
QQALSWEEQL RLHYQTLSPE KGEPQVARPT VTTAAAPVLP W*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5fd3_A	7e-13	486	558	4	77	Protein lin-54 homolog
5fd3_B	7e-13	486	558	4	77	Protein lin-54 homolog

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	3e-15	Tesmin/TSO1-like CXC domain-containing protein

Link Out ? help Back to Top
Phytozome	Dusal.0257s00025.1.p