PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0251s00011.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

GATA

Protein Properties

Length: 610aa MW: 64609.2 Da PI: 6.5817

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0251s00011.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	43.1	5.9e-14	245	276	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+nC+tt+TplWR++ g CnaCG+y++ +g Dusal.0251s00011.1.p 245 CTNCRTTHTPLWRKEA-GML-MCNACGIYFKNHG 276 ***********888.666.7********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50114	16.567	239	279	IPR000679	Zinc finger, GATA-type
SuperFamily	SSF57716	4.7E-12	239	288	No hit	No description
SMART	SM00401	4.0E-12	239	288	IPR000679	Zinc finger, GATA-type
Gene3D	G3DSA:3.30.50.10	4.0E-15	241	285	IPR013088	Zinc finger, NHR/GATA-type
CDD	cd00202	6.03E-13	244	279	No hit	No description
Pfam	PF00320	3.1E-11	245	276	IPR000679	Zinc finger, GATA-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence Send to blast
MLQEPPKLVA FGSLLPHSAL MAEDFSSLVS GERALVFAVA LCGKDFCAIA ETTGKKVPDV 60 EHWYATRFKG SKAYHTLRAG VDIAQRRRDT LIKLFNTLLA PQPGGQPPRF QSQTEALRAQ 120 FLVGDLPADK LLPLLCQVHG TEAVVAAADL RILLGDEAEE IPPPVTPEQT PHVPPAVPVL 180 TPPSLPSATT TATNSPEDHV YMHLHPSVAQ KGGGGSRRGS RASTPQRQTR TAQPEGDGGH 240 SPKVCTNCRT THTPLWRKEA GMLMCNACGI YFKNHGYHRR RSSNAGSVAT ANTTPSQVLD 300 LSALTLNQAN LQQLAHQPGA PASVHAPSSK GGYSSREQPP SMSGSHNSGS ELDPTKFTLV 360 YRTFVTSAVY LHREQPPSVP SSHYSGSELD PTKFTLVYQT FVTNAVYLHR EQPPSVPGSH 420 YSGSELDPNE CDQQFSDAPH VDRPSPLSGL RKPGSQGFAF ANQEPRSDDE DQFPSLPRPR 480 HEDMDPTAPT PRLPSGPVSP RLLEAAAAAK AANAATAAAA AAAEAAASAS QARIPLDATH 540 TFTSRACARI PACSPRLLEA AAAAEAAAMS SQPPIPQPPQ SDSSQAGAAD SMGDELEEDL 600 TVADDASQV*

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence Send to blast

MLQEPPKLVA FGSLLPHSAL MAEDFSSLVS GERALVFAVA LCGKDFCAIA ETTGKKVPDV  60
EHWYATRFKG SKAYHTLRAG VDIAQRRRDT LIKLFNTLLA PQPGGQPPRF QSQTEALRAQ  120
FLVGDLPADK LLPLLCQVHG TEAVVAAADL RILLGDEAEE IPPPVTPEQT PHVPPAVPVL  180
TPPSLPSATT TATNSPEDHV YMHLHPSVAQ KGGGGSRRGS RASTPQRQTR TAQPEGDGGH  240
SPKVCTNCRT THTPLWRKEA GMLMCNACGI YFKNHGYHRR RSSNAGSVAT ANTTPSQVLD  300
LSALTLNQAN LQQLAHQPGA PASVHAPSSK GGYSSREQPP SMSGSHNSGS ELDPTKFTLV  360
YRTFVTSAVY LHREQPPSVP SSHYSGSELD PTKFTLVYQT FVTNAVYLHR EQPPSVPGSH  420
YSGSELDPNE CDQQFSDAPH VDRPSPLSGL RKPGSQGFAF ANQEPRSDDE DQFPSLPRPR  480
HEDMDPTAPT PRLPSGPVSP RLLEAAAAAK AANAATAAAA AAAEAAASAS QARIPLDATH  540
TFTSRACARI PACSPRLLEA AAAAEAAAMS SQPPIPQPPQ SDSSQAGAAD SMGDELEEDL  600
TVADDASQV*

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP4830	8	10

Link Out ? help Back to Top
Phytozome	Dusal.0251s00011.1.p