PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0245s00005.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

MYB_related

Protein Properties

Length: 406aa MW: 43325.6 Da PI: 8.5161

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0245s00005.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.5	1.3e-12	11	55	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++ E+e ++ + +qlG+g+W+ I+rt+ +Rt+ q+ s+ qky Dusal.0245s00005.1.p 11 PWSQAEHEGFLLGLEQLGKGNWRGISRTFVPTRTPTQVASHAQKY 55 8***************************9***********9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.404	1	60	IPR017930	Myb domain
SMART	SM00717	4.0E-6	8	58	IPR001005	SANT/Myb domain
SuperFamily	SSF46689	2.03E-14	8	59	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.2E-14	9	58	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	5.6E-9	10	54	IPR009057	Homeodomain-like
Pfam	PF00249	1.3E-8	11	55	IPR001005	SANT/Myb domain
CDD	cd00167	1.31E-7	11	56	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence Send to blast
MASVLATRGV PWSQAEHEGF LLGLEQLGKG NWRGISRTFV PTRTPTQVAS HAQKYFLRAA 60 NGGSKRKSRF GGVTATYPAC QPTKVPRTAG SPLADSCSPT NSHHMAAPVQ QQQPSHLAPL 120 PQTLPVTSSA ALSAPIADTA SHHHSPEASC KASPSAIAAT ANSLPFAPNP ACPTLGVPLP 180 VHPTNSQPQV QHDRSEGPAM RPTVYGVPCF PMLPTGGLMG CLLPGLLPLN VRHTSQPTQH 240 HAPHHLHLPP TCVSALISQQ QEQLHEQQQH LHEQQLLQEQ QVQEQQQQWQ QHQQQCAADL 300 SYGPLHTLAL ASAGAERKED RASDVIPGGG PVKQEGTASP AASNVSYDSS CSNHSTHDST 360 FLSAALRAGL CRPEPVRGCS AQVRNRNGNH WVIRGTDNWV IRGLK*

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence Send to blast

MASVLATRGV PWSQAEHEGF LLGLEQLGKG NWRGISRTFV PTRTPTQVAS HAQKYFLRAA  60
NGGSKRKSRF GGVTATYPAC QPTKVPRTAG SPLADSCSPT NSHHMAAPVQ QQQPSHLAPL  120
PQTLPVTSSA ALSAPIADTA SHHHSPEASC KASPSAIAAT ANSLPFAPNP ACPTLGVPLP  180
VHPTNSQPQV QHDRSEGPAM RPTVYGVPCF PMLPTGGLMG CLLPGLLPLN VRHTSQPTQH  240
HAPHHLHLPP TCVSALISQQ QEQLHEQQQH LHEQQLLQEQ QVQEQQQQWQ QHQQQCAADL  300
SYGPLHTLAL ASAGAERKED RASDVIPGGG PVKQEGTASP AASNVSYDSS CSNHSTHDST  360
FLSAALRAGL CRPEPVRGCS AQVRNRNGNH WVIRGTDNWV IRGLK*

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP322	15	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	7e-24	MYB family protein

Link Out ? help Back to Top
Phytozome	Dusal.0245s00005.1.p