PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0223s00023.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family MYB_related
Protein Properties Length: 764aa    MW: 80297 Da    PI: 9.1902
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0223s00023.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.61.6e-145193246
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
       Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                          ++WT+ E+++lv+a+++ G++ W+ I++ ++  Rt+ ++k++w++
  Dusal.0223s00023.1.p 51 MPWTAAEELILVRAHQEQGNR-WSEISKLLP-ERTETNVKNHWNT 93
                          69*******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0071733142IPR001005SANT/Myb domain
CDDcd001671.50E-4137No hitNo description
PROSITE profilePS5129412.999144IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-6242IPR009057Homeodomain-like
PfamPF139215.7E-6246No hitNo description
SuperFamilySSF466893.15E-2126101IPR009057Homeodomain-like
PROSITE profilePS5129419.5284599IPR017930Myb domain
SMARTSM007172.5E-124997IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.0E-165198IPR009057Homeodomain-like
PfamPF002494.1E-135193IPR001005SANT/Myb domain
CDDcd001672.26E-105293No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    Send to blast
RLVGEHGENK WGQVCDELNA LFPGCHRTSK QCREKWNYQL CPSARKGHPG MPWTAAEELI  60
LVRAHQEQGN RWSEISKLLP ERTETNVKNH WNTALRRKHP ARCIDNQVSI LDQYQHNFGF  120
KSFTAEALRG LNCIGLCGLS QTSSLTEMDP ITNGMTRSAH TTPGRTLVED LPSPSKLSGA  180
AAPRPDATST PSTTGQAGTL HTEIPRIPFM GPPAAAHGTP AGARSSFFAS STAQGGAATA  240
VSHAVLPQGN MHQAASMAVG LRGLNPLDEQ HRPHGISVPP GWWQGSGCAA KEAAAVIGTP  300
ASKLAEPAGV GTGGESPITP MHAAELAAGK AGMDGRKEGQ GGKGVAGAHE GERISRAEAE  360
VQSGTLVGEV GAAHAAWQVG GGRSEALMLQ NGVQRSESPG PRDGVVQGQE VAVRRGSRAR  420
RSVQRSESPG PRDGNAQGQE IAVRRGARAR RGVHRSESPG PRDSVVQGQE VAVRRGARAR  480
RGVQRSQSPG PKDGNAQGQE IAMRRGARAR RSVQRSESPG PKDGIAQSQE MAVRRGARAR  540
RSMQRSESPG PEDGHAQGKG EKSMHDGMQP LAAEFRGASH HPSAASAAAA TAAGEEQLEE  600
EEEAGILEAA GILQALQGLG GGFEDGVELG ALQEKSLSEA EGAGECEAEE RGQKEDGEED  660
MEGVEEGGGE EEEEGSAPAD SRHKQGNKRS SNVAAGPSEE VDSMFGRGKR QRTNKGALQL  720
LQQPCRRSHA AWAPRQAAAL RGGGKPRGRP PKSLGPSRSK GKK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C7e-1919817104C-Myb DNA-Binding Domain
1msf_C7e-1919817104C-Myb DNA-Binding Domain
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1539545RRSMQRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.19e-22myb domain protein 118