PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0179s00020.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family MYB_related
Protein Properties Length: 1778aa    MW: 198180 Da    PI: 6.2199
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0179s00020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.9e-169931037247
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
       Myb_DNA-binding    2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47  
                            g W ++E e+l+++v+++G + W+ +a+++g +Rt+kqc++rwq++
  Dusal.0179s00020.1.p  993 GYWKEDEKERLLEGVELHGLDKWSEVASYVG-TRTAKQCRERWQNV 1037
                            57*****************************.************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0071715703931IPR001005SANT/Myb domain
PROSITE profilePS500904.809904929IPR017877Myb-like domain
SuperFamilySSF466891.16E-8914981IPR009057Homeodomain-like
PROSITE profilePS512947.81933986IPR017930Myb domain
SMARTSM007170.0081937986IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-6941983IPR009057Homeodomain-like
PROSITE profilePS5129420.3479871042IPR017930Myb domain
SMARTSM007176.7E-159911040IPR001005SANT/Myb domain
SuperFamilySSF466895.87E-189911090IPR009057Homeodomain-like
PfamPF002491.5E-159931037IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.4E-189941044IPR009057Homeodomain-like
CDDcd001671.33E-139951038No hitNo description
PROSITE profilePS500906.73710391094IPR017877Myb-like domain
SMARTSM007170.007910431096IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.3E-1010451093IPR009057Homeodomain-like
CDDcd001678.56E-510461093No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1778 aa     Download sequence    Send to blast
MQGEPDEDYK NLLGDLDPLM HIFGKTGTSA ARALERRFFG DGGGAARRKG GRGPQHEKPA  60
EEGYMSVSDL SEEDEGDEEA PSPSGPQSHQ QQQQQREQQQ LQQQQQLRQL HQQRVQQLQQ  120
QVPQQRVQQQ QRQQQQPQQQ RVQQQVPQQQ AWQQQRQQRQ QQQGLQQQQP GQQRQTQQQR  180
EQQPQQQVPQ QPAQQQQRQQ QPPQQQREQQ LQQQPPQQQP QQQQRQQRQP QQQRVQQLQQ  240
QVPQQQERQQ QQQQQQRRPA AGWVRSASDD GAQRWADDEE DDDDDDDDND DDDDDVLDEE  300
EDNEEEEEEE EVNEGESGGA DSEGSGGSEE GNETEKGLGF LPGPVQDMAL LPTAPAAGLG  360
HTSHHRVHHQ AAGAARGQGL SQNPADTPAA ARGEVGHTRH HLGQHQAADA AHRQGLSQDP  420
DGAGAAAGGE VSHTLHHMQH QAANAARRQG LSQDPADTLA VAGVEVGHIG RHAQHQAADA  480
ARRQGLSVDP ADTPAVAGVE VGHIGRHAQH QAADAARRQG LSVDLYDASA AAETRAHQNA  540
AGGRFRGVEG DEEEVEAECA PGVGAQDGAE DEEEEEEEEE EEDAFQELQP GERLPQGSRL  600
AALYDALAAN RALCGHLKEV VLPRLDHLLD KNWAHSQAVQ AVPTVRKTRK EPEDPEANTL  660
HSGQAMLATG TSKFWMLDGS VPMPNPDTTA LANRLRALPS TYARTRWSVQ QMAALRKGVE  720
AEIQAKLSHE ALRAIQSSNE RAAMLLEQQQ QEQEAQQQQQ QQQEKGQEAQ ELQGQELQGQ  780
QQQQQQQQQQ HHHHQQKQQQ GQEEGEEEQE PQGEKVQGQQ EQHEQPQPQA AATGALQPQP  840
QAAADGTIQT RGLRIQDLSA RFAAIKDVTP ESAQGQRIAA ELDASAWERI SCGFVKDRSP  900
MECKWEEVAL ALGTGRSGAQ CLREWLRATH PQGMKHKNTV WSPEDSKKLE ALVARKGRNW  960
QAISLEFHGK YDRHQIRDRW HGQAEMQMFR HLGYWKEDEK ERLLEGVELH GLDKWSEVAS  1020
YVGTRTAKQC RERWQNVISK EVNRGRFTPA EVEALKNAAK TVMQEEGRLV WGKMAKLMPR  1080
RTDDQIRRAW QQLQTHGKVT VGRAYELEQQ RARKQQQARG ERTANEGAVE PEDTEGEIGT  1140
EEVPWGSGKE EEEEENGRGK GRKGKGKGNA KSGEVKGVRS KQAQKRRGEE VKRGGQGDAK  1200
RGRDKIQREE ASDDEDEDEV EEEQGEEDRE INEEQEEGMG LQEREEEEGS GTDQERSRKR  1260
RRVSNTRGKS KPRAASVSKG KVDGPVRKAP AASPKPKAPS RPHAGKCGLL ILAKTACHGG  1320
KGKNKKPQPQ AQPLPQANAP QSTDAAAPTS PTLSITRPRK KSQPAQGAAS RQAVSSAAQP  1380
QQLEQGAGPV GSEEVGRQGV AAEPGQEAQQ QVHGAGKRGR GPAQRKAAGR AGHETQLQVK  1440
GTSKRGKGPS RQDVAEGHEA QQQVEEGASK RRKGPPRQDV AEGAGNEARQ QVEEGASKRR  1500
RGPPRQDVAE GAGHEAQQQV EGGASKRRKG PPRLDVAEGA GQEAQQQVEE GASKRRKGPA  1560
RQPAREASKQ RGHSGAKGSD DDKGGVQEAD PESGVQQKML VSREHDQPKQ QQQQQQLLPL  1620
PPQQHAEPQQ LQLQPQVQQT QPHHQEQQQQ QQLLLPPQQH AEPQQLQLQP QVQQTQPHHQ  1680
EQQQQPQDQH LQHHLQLQQQ QEHHHQQQQQ QQQQQQQQQQ QQQQQQQQQQ EQPQPQVQQL  1740
QHHLQLQQQQ QQPKEQRLQH TRSARARKPN VRLGDFG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C1e-1293910917152MYB PROTO-ONCOGENE PROTEIN
1h89_C1e-1293910917152MYB PROTO-ONCOGENE PROTEIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
112571261RKRRR
212581262KRRRV
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP42351111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-23myb domain protein 4r1