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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Dusal.0173s00017.2.p | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 2665aa MW: 278156 Da PI: 7.8401 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 21.5 | 5.3e-07 | 94 | 130 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
W++ Ed+ll+ +++++G++ W++Ia+ +Rt q+
Dusal.0173s00017.2.p 94 YWSPGEDQLLAAGIARFGTD-WEAIAKAYLPTRTSQQV 130
6*******************.*****97666***9998 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51294 | 9.454 | 87 | 142 | IPR017930 | Myb domain |
| SuperFamily | SSF46689 | 1.58E-7 | 89 | 136 | IPR009057 | Homeodomain-like |
| Gene3D | G3DSA:1.10.10.60 | 3.9E-8 | 91 | 139 | IPR009057 | Homeodomain-like |
| SMART | SM00717 | 1.1E-6 | 91 | 140 | IPR001005 | SANT/Myb domain |
| Pfam | PF00249 | 1.7E-6 | 94 | 131 | IPR001005 | SANT/Myb domain |
| CDD | cd00167 | 5.35E-6 | 95 | 138 | No hit | No description |
| SMART | SM00717 | 63 | 155 | 271 | IPR001005 | SANT/Myb domain |
| Gene3D | G3DSA:1.20.1000.10 | 1.6E-4 | 1486 | 1557 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 2665 aa Download sequence Send to blast |
MSVLDVPPLR FLPAYDAAIE QLPMLEKSGL QELIDLEASN AKERKKLFRR GKWMHPFIGT 60 WDKVVLPVLE SVMPQGTMDP LLFYRCAPIM PRHYWSPGED QLLAAGIARF GTDWEAIAKA 120 YLPTRTSQQV YVRQKNLIAR RKASSCVPQA KAAVIEGPLT PEEKAKIIEG LSTLSGTSVH 180 GEYLGTGEGG SLPWYLTPSS GFVPGGPKAA AAAAAALTGQ AMVPGGDHQA EAATAQSLAS 240 SAGLWQALSD EWLPHRRPEV LAKLWHESLK QDKENAIQAA PPQLQGLQST PHQQQHNQQH 300 PYYPQQQCHP HHPHHQPLLP SSHAAHGQST RVGHIASAST TALQPFPQLP LPPPPSTPRM 360 IGEADWAAAA AAAELVVAGL EANPRPDHQQ QQYEHHHQQQ QQQQQGAAMQ AGQAEPAAAA 420 AATAAEAAGV TQLGPMADTG GAGRTSGARQ AYQGPSEVHT TNIHAAAATG TGAAANGTAA 480 GSSPAGGASG GIGEPRAQRR GLDPMRQSLA NHLQEMRKLN SFRAASTATQ RQRAAKRRAA 540 AQQEQEQEED FQAEEADPQA DEQQPEQGQE QEQQGQQARL DGDLQALLLE GQPLEEPAGQ 600 RRRTQQRRGS KAGAGSRSSR GRGGGGRGRG KKARLGASGG DAEGAFVPDL FSAEHLSPSE 660 VLAYASQAEA FFGGGLGGEG GEGGAGWAAL LTESVVGDAA NDAQGMREGD SLQAMAGMRG 720 RRPGRGGGGS GARGGSRANK RRAAAPAAAR GARGAGDVLQ QQQQRQQQPR PRKRPRRNPG 780 GNDGDGTGAG AAAAAAAAAA AVVAGAEVAP GNLAGAGAAG WDTHEGIDTV GAEVVEDGMD 840 VDGDGGVVEP ARSSPTAAPA PDGAAAGAAA DAARPEGSAQ PAPGAAPLAQ GPETGPYDAL 900 PGAASGTQPT RRGPPRQKRN CAGAHAARAG GHGEGAGTQQ QHAIAPHAQQ QQQQQQQQQQ 960 KGPARADPPN TRHGSSNTPP VSTHRGNTTN TAVGSKQIQA PPNSRQAPPT STRTNATTTK 1020 SRAARPGSSA APANGIHSKR PGKPNTSASR AAVGGSSSAH PAPQNPIAQG DCHRNSGNAG 1080 SNTAVGIGGS YPPRTTDSPG LNALCAAAEL SNEEQHAHEQ QQGQQHAHAS LGHARGSMAH 1140 LGPVLPRRSN THNTPHPANH PSALPSHNTG AQGFHGNSAH NSLPPSLATL SSHKGGLLGC 1200 YGGGGGGGRV EGGSGGREPG SRPLQLSLLN EDAASWSLPD LMDFMSHSRS RPPSARAHPM 1260 HPSSNNNNNN SNKNNSHSHS HAGGPLGAGR QSPGLPLLST GAPGFHSNSF LLSGSSMASL 1320 GLFGGGNTTD NNHILNNSIL DDINKNSSLL LPSSSRSIDR HIQQLQQLPQ QQTQGASSSI 1380 SLLSIPSLPL RRNTLAAPLL SPSHPTSLHH HPRLQSTTNN NGSIPNHNPS HLASNTSRTT 1440 DPHLLPLAPL NTHTPGLDAP NSGPLNTCTH SVAANNIPLA PDAAAAAAAA SFAAMTSQQH 1500 QQQHQQQQQQ QQQQHAPVHQ ISQAPGSVSL PLLQQSLNQQ PQQQQQQQQQ QQQQDLQLSI 1560 CGNSISQPSL PFAAGDVPDF SLGLSSWGIG LSNLGGPLPP TFPTSNSSLP NSSGAPHPVH 1620 PSPYNTPLPP PPPPPPPPSS QNTNDALPPV SHAPNASNPP PPVPHAPNPQ PAPGNVPHGP 1680 GSYVGNAPYL PAWAPQSLQH NSAPAGAPTQ HETLPLTSMR ASPPAPTASR PLQHASAPAG 1740 APSQHDGLPP TSMHASPFLP TAQQPLHHTS APAGAPKNHA AVHLCPPMSH PSSAPAPIQQ 1800 PPKVPNCSAL SPWQQYSPNA SQRSHAHVPA TQQDFTTQHT PAVPHSSAAP LSRERMPAAG 1860 QRSLAPVPAT QQNFATQNTP APQHSPAAPA SQQLMPSQHV HSSTPTTQPP ASARPATPTQ 1920 APPPAAPPAT QAIADPAAQP PHDPSTQPLP AAAAEAQAAT GSRPRHAATQ PTSYPSLQPP 1980 LPPLPPAATT AAAAAHGTTP SPPASSLPHF SQPSAPAAAA AAAHGATPSP PTSSLPHFPQ 2040 PAPAASGMAA ASRGSARSRG SSGVEDALAD AVQSGACGFG AAAMAAFKGS SSHTAAGAAT 2100 PSHSQPAHAQ AQVHSQTPTY THPACAQQIF TSTQQVLAHK PAAYAHHTHA LPHCYTPSHA 2160 SFPLSGSNQQ HRHQSTIQGQ IEPPNPQPPL PPLPRAHTPA SPEGLAAIQQ HLNHYPQATQ 2220 DVQQQQQQQQ HFLEEELPGY SNSCIDDHIG ALEHAHEGFT REEQAHQEHA QVGPAHKKHA 2280 HADHRDREFQ PMAPNELLQQ HQHPPQLQSL LHTQQQQQQQ QQEQQQHPHP AQPQAMATSP 2340 SQSQPVPTSQ PLPLTTPAGP SQPLPASQSS LVLPAFLSQL PHPKQWPQHH PPQSQQLPHS 2400 QQQQQQQQQQ QQQQRQQQQE ETPTHLSPLP HQQQQQQQQQ QQCQLPHKVP MHQVIPGQQQ 2460 QHLHHEAPTQ SLQCPPTPTA AAQAQQLMPE QEPFTQHLLQ QQQHPWHPSP AHLTPAGAQQ 2520 LMRHVSLAPP HALQHAAPGV PAPRDHAEAQ SLVQHNPHAP PNAWQQAACS APNASPQQLA 2580 EHEEELILEA VVEKGDHPTT FALLAEQLTH SRAAQSTAAQ LTYGSLPGVV SAQTVEHCYR 2640 ALVQRELRAA LQLRQQQRQG RAAL* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 769 | 775 | RPRKRPR |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Link Out ? help Back to Top | |
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| Phytozome | Dusal.0173s00017.2.p |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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