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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Dusal.0173s00017.1.p | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 2709aa MW: 282538 Da PI: 7.5705 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 21.5 | 5.4e-07 | 138 | 174 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
W++ Ed+ll+ +++++G++ W++Ia+ +Rt q+
Dusal.0173s00017.1.p 138 YWSPGEDQLLAAGIARFGTD-WEAIAKAYLPTRTSQQV 174
6*******************.*****97666***9998 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51294 | 9.454 | 131 | 186 | IPR017930 | Myb domain |
| SuperFamily | SSF46689 | 1.58E-7 | 133 | 180 | IPR009057 | Homeodomain-like |
| Gene3D | G3DSA:1.10.10.60 | 4.0E-8 | 135 | 183 | IPR009057 | Homeodomain-like |
| SMART | SM00717 | 1.1E-6 | 135 | 184 | IPR001005 | SANT/Myb domain |
| Pfam | PF00249 | 1.7E-6 | 138 | 175 | IPR001005 | SANT/Myb domain |
| CDD | cd00167 | 5.45E-6 | 139 | 182 | No hit | No description |
| SMART | SM00717 | 63 | 199 | 315 | IPR001005 | SANT/Myb domain |
| Gene3D | G3DSA:1.20.1000.10 | 1.6E-4 | 1530 | 1601 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 2709 aa Download sequence Send to blast |
MPMSAVSAEA AHEGLGGPAG PAEGQELQEA PAADTWQPVL LQDAMSVLDV PPLRFLPAYD 60 AAIEQLPMLE KSGLQELIDL EASNAKERKK LFRRGKWMHP FIGTWDKVVL PVLESVMPQG 120 TMDPLLFYRC APIMPRHYWS PGEDQLLAAG IARFGTDWEA IAKAYLPTRT SQQVYVRQKN 180 LIARRKASSC VPQAKAAVIE GPLTPEEKAK IIEGLSTLSG TSVHGEYLGT GEGGSLPWYL 240 TPSSGFVPGG PKAAAAAAAA LTGQAMVPGG DHQAEAATAQ SLASSAGLWQ ALSDEWLPHR 300 RPEVLAKLWH ESLKQDKENA IQAAPPQLQG LQSTPHQQQH NQQHPYYPQQ QCHPHHPHHQ 360 PLLPSSHAAH GQSTRVGHIA SASTTALQPF PQLPLPPPPS TPRMIGEADW AAAAAAAELV 420 VAGLEANPRP DHQQQQYEHH HQQQQQQQQG AAMQAGQAEP AAAAAATAAE AAGVTQLGPM 480 ADTGGAGRTS GARQAYQGPS EVHTTNIHAA AATGTGAAAN GTAAGSSPAG GASGGIGEPR 540 AQRRGLDPMR QSLANHLQEM RKLNSFRAAS TATQRQRAAK RRAAAQQEQE QEEDFQAEEA 600 DPQADEQQPE QGQEQEQQGQ QARLDGDLQA LLLEGQPLEE PAGQRRRTQQ RRGSKAGAGS 660 RSSRGRGGGG RGRGKKARLG ASGGDAEGAF VPDLFSAEHL SPSEVLAYAS QAEAFFGGGL 720 GGEGGEGGAG WAALLTESVV GDAANDAQGM REGDSLQAMA GMRGRRPGRG GGGSGARGGS 780 RANKRRAAAP AAARGARGAG DVLQQQQQRQ QQPRPRKRPR RNPGGNDGDG TGAGAAAAAA 840 AAAAAVVAGA EVAPGNLAGA GAAGWDTHEG IDTVGAEVVE DGMDVDGDGG VVEPARSSPT 900 AAPAPDGAAA GAAADAARPE GSAQPAPGAA PLAQGPETGP YDALPGAASG TQPTRRGPPR 960 QKRNCAGAHA ARAGGHGEGA GTQQQHAIAP HAQQQQQQQQ QQQQKGPARA DPPNTRHGSS 1020 NTPPVSTHRG NTTNTAVGSK QIQAPPNSRQ APPTSTRTNA TTTKSRAARP GSSAAPANGI 1080 HSKRPGKPNT SASRAAVGGS SSAHPAPQNP IAQGDCHRNS GNAGSNTAVG IGGSYPPRTT 1140 DSPGLNALCA AAELSNEEQH AHEQQQGQQH AHASLGHARG SMAHLGPVLP RRSNTHNTPH 1200 PANHPSALPS HNTGAQGFHG NSAHNSLPPS LATLSSHKGG LLGCYGGGGG GGRVEGGSGG 1260 REPGSRPLQL SLLNEDAASW SLPDLMDFMS HSRSRPPSAR AHPMHPSSNN NNNNSNKNNS 1320 HSHSHAGGPL GAGRQSPGLP LLSTGAPGFH SNSFLLSGSS MASLGLFGGG NTTDNNHILN 1380 NSILDDINKN SSLLLPSSSR SIDRHIQQLQ QLPQQQTQGA SSSISLLSIP SLPLRRNTLA 1440 APLLSPSHPT SLHHHPRLQS TTNNNGSIPN HNPSHLASNT SRTTDPHLLP LAPLNTHTPG 1500 LDAPNSGPLN TCTHSVAANN IPLAPDAAAA AAAASFAAMT SQQHQQQHQQ QQQQQQQQHA 1560 PVHQISQAPG SVSLPLLQQS LNQQPQQQQQ QQQQQQQQDL QLSICGNSIS QPSLPFAAGD 1620 VPDFSLGLSS WGIGLSNLGG PLPPTFPTSN SSLPNSSGAP HPVHPSPYNT PLPPPPPPPP 1680 PPSSQNTNDA LPPVSHAPNA SNPPPPVPHA PNPQPAPGNV PHGPGSYVGN APYLPAWAPQ 1740 SLQHNSAPAG APTQHETLPL TSMRASPPAP TASRPLQHAS APAGAPSQHD GLPPTSMHAS 1800 PFLPTAQQPL HHTSAPAGAP KNHAAVHLCP PMSHPSSAPA PIQQPPKVPN CSALSPWQQY 1860 SPNASQRSHA HVPATQQDFT TQHTPAVPHS SAAPLSRERM PAAGQRSLAP VPATQQNFAT 1920 QNTPAPQHSP AAPASQQLMP SQHVHSSTPT TQPPASARPA TPTQAPPPAA PPATQAIADP 1980 AAQPPHDPST QPLPAAAAEA QAATGSRPRH AATQPTSYPS LQPPLPPLPP AATTAAAAAH 2040 GTTPSPPASS LPHFSQPSAP AAAAAAAHGA TPSPPTSSLP HFPQPAPAAS GMAAASRGSA 2100 RSRGSSGVED ALADAVQSGA CGFGAAAMAA FKGSSSHTAA GAATPSHSQP AHAQAQVHSQ 2160 TPTYTHPACA QQIFTSTQQV LAHKPAAYAH HTHALPHCYT PSHASFPLSG SNQQHRHQST 2220 IQGQIEPPNP QPPLPPLPRA HTPASPEGLA AIQQHLNHYP QATQDVQQQQ QQQQHFLEEE 2280 LPGYSNSCID DHIGALEHAH EGFTREEQAH QEHAQVGPAH KKHAHADHRD REFQPMAPNE 2340 LLQQHQHPPQ LQSLLHTQQQ QQQQQQEQQQ HPHPAQPQAM ATSPSQSQPV PTSQPLPLTT 2400 PAGPSQPLPA SQSSLVLPAF LSQLPHPKQW PQHHPPQSQQ LPHSQQQQQQ QQQQQQQQRQ 2460 QQQEETPTHL SPLPHQQQQQ QQQQQQCQLP HKVPMHQVIP GQQQQHLHHE APTQSLQCPP 2520 TPTAAAQAQQ LMPEQEPFTQ HLLQQQQHPW HPSPAHLTPA GAQQLMRHVS LAPPHALQHA 2580 APGVPAPRDH AEAQSLVQHN PHAPPNAWQQ AACSAPNASP QQLAEHEEEL ILEAVVEKGD 2640 HPTTFALLAE QLTHSRAAQS TAAQLTYGSL PGVVSAQTVE HCYRALVQRE LRAALQLRQQ 2700 QRQGRAAL* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 813 | 819 | RPRKRPR |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Chlorophytae | OGCP10189 | 2 | 2 |
| Link Out ? help Back to Top | |
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| Phytozome | Dusal.0173s00017.1.p |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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