PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0165s00008.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | MYB_related | ||||||||
Protein Properties | Length: 1293aa MW: 127656 Da PI: 6.3152 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 42 | 86 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +W + E+e+++ av ++G + Wk+I +++g +++ q++s+ qk+ Dusal.0165s00008.1.p 42 RTSWLPHEHEKFLTAVSLYGRN-WKKIEEYVG-TKSSVQIRSHAQKH 86 678*****************66.*********.************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 9.72E-13 | 36 | 91 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 17.042 | 39 | 91 | IPR017930 | Myb domain |
TIGRFAMs | TIGR01557 | 6.4E-12 | 41 | 89 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 1.3E-11 | 41 | 89 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.8E-7 | 42 | 87 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 3.9E-11 | 42 | 86 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.89E-8 | 44 | 87 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1293 aa Download sequence Send to blast |
MLAGQPEGDG PSAAAPQPGA TQQQQSNAGK APRKPYCLTR PRTSWLPHEH EKFLTAVSLY 60 GRNWKKIEEY VGTKSSVQIR SHAQKHFAKV ERGDAGTESI AIPPPRYKRK STKPKVEQQL 120 QFEHQQQLET EQEREHKQQW QQAQHQQQSA GGAATLAELD SSSKHSKASA FQASAIQGDA 180 ASPSPTNAAA IASANTEVHA QLQALIANHN AQLLQQQSSQ ASLQSINSNS FTWQPGNFDF 240 HQALSKPAAP GIPTFSNGFW AMQPAPSAPP AVLQPVILQP PPPLINTAAS APPLGPSQPL 300 AQAVSAPPLG MSQPLACTRP LPPPGIVPAA SIASLVVGAD PSDGNAAPVA AATPCGAGSG 360 NMDCKGAGEG SAGMERSNGG AASVATPPPA ADSEPELRGA PATAWSSMET HGSRCTDKAV 420 SPVEGGGGTG VSGTQMRGSW SAAAPDSWGS NAESGGGSAM GSAGEAGARL GSSTSCLTAG 480 GSSQGSGVLR PQARRYHAPH GPGQLAHWAE EQGRERAVGT MLAATSAPPS AAGAAAAAAA 540 AAAAAVANGA QPAAAAATEV RRVKRASSDM GGVRRVPSKS PLQEDEPLGQ SAVGVPPLGT 600 EEEGCKATGA SSGFKPSGSA VAQAQQQELP TASAGAAGGL NSSMLLHNLR RDGAAEWVVG 660 DSALGSLHVQ AVAGSEIPGR APEIPDPAAA AAAAAATGAG ASHGCGSNAP FSNKGAPEVG 720 QSGALPPLAK GTGGRSTGGR SGGQSTDSGG GAGSSGSDSG SQGGHPHRSK LQRRQPKASN 780 SRNGSLDMLR ALSAAHLLQR NRGSSVHPSA VIGSSSSYSM RAPAIRSSPP PPAIADAVAN 840 AANRHGQSGS RTTDALLAAA AAAAAAASAV EPPQGQSPGA SLSLASGPAA AAANPAPVAT 900 SAACQNVAAA PQQPEALPAP HTSGAHTERQ GSNAWALRSG CGSDSKSGGS AGGVSGGDSV 960 AGAAQVNQGG GSMSWGVSRE GSREGDGPGS MGEGEGSRNG SRNSAGCRNA EDGKAGSNAS 1020 GSREGGSGSG GGASCDGGVL SRDERPGAAQ AGVAGSYFSL YVALDRQGRP SANEERMERE 1080 RQQKEQQEAE EGFEPPCGAA AGSALVGPPS AFAPYHAPTH ATPAAIPHAA APPEVVPEDG 1140 SCLLPATEPA AQRQVDAQDN SGTSDGMAEE PGQGAVSDGM AEDQQPPGVA PEENMMEQRH 1200 ACTVEEGGMV PEGARGPLSV GNAGTAEAGA LPVWAQTSTA AAAAAGMAAS AMNEAAAVAV 1260 ADAQASMTAT AAGEATAAAA ANAAVQPTPM QG* |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP454 | 14 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.2 | 1e-24 | MYB_related family protein |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0165s00008.1.p |