PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dusal.0150s00014.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 257aa MW: 27532.4 Da PI: 9.1509 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.7 | 7.6e-10 | 8 | 56 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s+y+GV+wd k+ W++e++ + r ++gk+ + Aa+a++aa +++ Dusal.0150s00014.2.p 8 SQYPGVTWDTKTPGWRVEVYT------CgLRLYVGKYADEATAAAAHDAALWRWR 56 78****************666......56**********99********976665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 7.85E-6 | 8 | 59 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 10.56 | 9 | 69 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.4E-5 | 9 | 57 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-4 | 10 | 61 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 257 aa Download sequence Send to blast |
MKRKSNKSQY PGVTWDTKTP GWRVEVYTCG LRLYVGKYAD EATAAAAHDA ALWRWRGGDS 60 KALENLNNPH LYSNPEQAPP DAETYLSPAA LVRLEACQVE AALRASRSHP KNKVAKRKRP 120 ELSASGDSEG DATISDSKED SDAEANDMLA LDGHLHGSTK EGKLNARDYA RKPTHITACD 180 PAQSSRQQTN RREYARKLSH ITACDPAQSS RSTTAASSTA ATGRAAKQHG KGAEGYGKCG 240 ESAQLHAGKD GRPAGC* |
Link Out ? help Back to Top | |
---|---|
Phytozome | Dusal.0150s00014.2.p |