PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0126s00012.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | WRKY | ||||||||
Protein Properties | Length: 182aa MW: 19560.6 Da PI: 9.161 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89.3 | 3.2e-28 | 103 | 158 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYG K vkgs +prsYY+C++++Cp++k ver+a + +v + Y+g+Hnh+ Dusal.0126s00012.1.p 103 EDGYQWRKYGEKIVKGSVNPRSYYKCSTSTCPARKTVERAA--GAIVATEYKGQHNHQ 158 7****************************************..**************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.5E-26 | 93 | 160 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 24.225 | 97 | 160 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.59E-23 | 100 | 160 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-27 | 102 | 159 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.4E-23 | 103 | 158 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MDPLHITPLE IRPLEDEASN SLAQTPDSLA QQQKQQASSF FSALFGGGSG GQQQQQQQQG 60 EQAAPPVQPL PLHHEDSTNC QQPTSSATAN STASKVRAAS ANEDGYQWRK YGEKIVKGSV 120 NPRSYYKCST STCPARKTVE RAAGAIVATE YKGQHNHQAP TLKTAKQRKV SGVFLGGWLH 180 T* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-18 | 103 | 160 | 18 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 1e-18 | 103 | 160 | 18 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP469 | 16 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.2 | 1e-20 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0126s00012.1.p |