PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0073s00031.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | WRKY | ||||||||
Protein Properties | Length: 468aa MW: 49886.1 Da PI: 7.909 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 82.6 | 3.9e-26 | 165 | 221 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYG K vkgs++prsYY+C+ +gCp+kk ver++ ++ ++++ Y+g H h+ Dusal.0073s00031.1.p 165 HDGWQWRKYGEKIVKGSTNPRSYYKCSNQGCPAKKIVERNT-EGVIFNTEYKGLHCHP 221 6***************************************9.**************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.0E-24 | 159 | 223 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 24.202 | 159 | 223 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.1E-22 | 161 | 223 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.6E-28 | 164 | 222 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.5E-21 | 166 | 221 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence Send to blast |
MFQHSCSDLS VQPFSSPKAP GPSKLQQQHH KQHAHQSLPA DPEDQAPKRA SPARNTSKGA 60 PSALPPTDAP SQSQQQSAAQ HQPPEANGAE AGLLPLQSCT AATSPDDGVK GEETGSAAAA 120 ADPPAAALPP VSAEVPLVEA TPQASSKGLL PQLDPQKTLH YAANHDGWQW RKYGEKIVKG 180 STNPRSYYKC SNQGCPAKKI VERNTEGVIF NTEYKGLHCH PAPATVKAAA KCRTTKPGKA 240 QQAAQAPDPP CVPQESNTPT RRDSEGGNVH SGHGSDPAAA PPTIPRGTAH DGETLFGDWL 300 LAMRQEHSAS MWGAEEGDGA TATPGRVINF GQRDAAQDLA VAVQNLQSPR PLIVWIADRH 360 SFALRHCFGG ASPKHSQLQL EQALEAALSP RPLTLNLIQQ QQQQQHGQLH SSQQFARPSK 420 RPQGGHQGTG QDGTLSPSHS QPFSQWLEGY VQQQQQQLQQ LHQSHRA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-13 | 165 | 223 | 15 | 74 | WRKY transcription factor 1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP469 | 16 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 2e-18 | WRKY DNA-binding protein 4 |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0073s00031.1.p |